Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD3L1Q8WWY6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MBD3L1Q8WWY6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD3L1Q8WWY6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 AL121603.2-201ENST00000557373 2117 ntBASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
MBD3L1Q8WWY6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
MBD3L1Q8WWY6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
MBD3L1Q8WWY6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
MBD3L1Q8WWY6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MBD3L1Q8WWY6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MBD3L1Q8WWY6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MBD3L1Q8WWY6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MBD3L1Q8WWY6 KRT18P10-201ENST00000388836 1287 ntBASIC17.64■□□□□ 0.41
MBD3L1Q8WWY6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MBD3L1Q8WWY6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
MBD3L1Q8WWY6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.64■□□□□ 0.41
MBD3L1Q8WWY6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.64■□□□□ 0.41
MBD3L1Q8WWY6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
MBD3L1Q8WWY6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.64■□□□□ 0.41
MBD3L1Q8WWY6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
MBD3L1Q8WWY6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.63■□□□□ 0.41
MBD3L1Q8WWY6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L1Q8WWY6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
MBD3L1Q8WWY6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L1Q8WWY6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L1Q8WWY6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L1Q8WWY6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MBD3L1Q8WWY6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L1Q8WWY6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L1Q8WWY6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L1Q8WWY6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L1Q8WWY6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L1Q8WWY6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
MBD3L1Q8WWY6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L1Q8WWY6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L1Q8WWY6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MBD3L1Q8WWY6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L1Q8WWY6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.62■□□□□ 0.41
MBD3L1Q8WWY6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MBD3L1Q8WWY6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L1Q8WWY6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L1Q8WWY6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L1Q8WWY6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L1Q8WWY6 AL162393.1-201ENST00000437852 946 ntBASIC17.62■□□□□ 0.41
MBD3L1Q8WWY6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L1Q8WWY6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.62■□□□□ 0.41
MBD3L1Q8WWY6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L1Q8WWY6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L1Q8WWY6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L1Q8WWY6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L1Q8WWY6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L1Q8WWY6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.61■□□□□ 0.41
MBD3L1Q8WWY6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
MBD3L1Q8WWY6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L1Q8WWY6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
MBD3L1Q8WWY6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.61■□□□□ 0.41
MBD3L1Q8WWY6 AL157400.5-201ENST00000507624 621 ntBASIC17.61■□□□□ 0.41
MBD3L1Q8WWY6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L1Q8WWY6 AC073130.3-201ENST00000624389 2278 ntBASIC17.61■□□□□ 0.41
MBD3L1Q8WWY6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
MBD3L1Q8WWY6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
MBD3L1Q8WWY6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MBD3L1Q8WWY6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD3L1Q8WWY6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.6■□□□□ 0.41
MBD3L1Q8WWY6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.6■□□□□ 0.41
MBD3L1Q8WWY6 DUX4L11-201ENST00000611504 1267 ntBASIC17.6■□□□□ 0.41
MBD3L1Q8WWY6 DUX4L12-201ENST00000614593 1267 ntBASIC17.6■□□□□ 0.41
MBD3L1Q8WWY6 DUX4L14-201ENST00000621227 1267 ntBASIC17.6■□□□□ 0.41
MBD3L1Q8WWY6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MBD3L1Q8WWY6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD3L1Q8WWY6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD3L1Q8WWY6 AC079630.1-202ENST00000618127 1840 ntBASIC17.6■□□□□ 0.41
MBD3L1Q8WWY6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD3L1Q8WWY6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD3L1Q8WWY6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MBD3L1Q8WWY6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
MBD3L1Q8WWY6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD3L1Q8WWY6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD3L1Q8WWY6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L1Q8WWY6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
MBD3L1Q8WWY6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L1Q8WWY6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.59■□□□□ 0.41
MBD3L1Q8WWY6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms