Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRUB1Q8WWH5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.57■□□□□ 0.88
TRUB1Q8WWH5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.57■□□□□ 0.88
TRUB1Q8WWH5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRUB1Q8WWH5 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRUB1Q8WWH5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.57■□□□□ 0.88
TRUB1Q8WWH5 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
TRUB1Q8WWH5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRUB1Q8WWH5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRUB1Q8WWH5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TRUB1Q8WWH5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRUB1Q8WWH5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRUB1Q8WWH5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRUB1Q8WWH5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TRUB1Q8WWH5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.56■□□□□ 0.88
TRUB1Q8WWH5 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRUB1Q8WWH5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.56■□□□□ 0.88
TRUB1Q8WWH5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRUB1Q8WWH5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRUB1Q8WWH5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.56■□□□□ 0.88
TRUB1Q8WWH5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRUB1Q8WWH5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRUB1Q8WWH5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.56■□□□□ 0.88
TRUB1Q8WWH5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRUB1Q8WWH5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRUB1Q8WWH5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRUB1Q8WWH5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRUB1Q8WWH5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.55■□□□□ 0.88
TRUB1Q8WWH5 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.55■□□□□ 0.88
TRUB1Q8WWH5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRUB1Q8WWH5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
TRUB1Q8WWH5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.55■□□□□ 0.88
TRUB1Q8WWH5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRUB1Q8WWH5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRUB1Q8WWH5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRUB1Q8WWH5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TRUB1Q8WWH5 AC073130.3-201ENST00000624389 2278 ntBASIC20.55■□□□□ 0.88
TRUB1Q8WWH5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRUB1Q8WWH5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRUB1Q8WWH5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRUB1Q8WWH5 ESRRAP2-201ENST00000418437 1549 ntBASIC20.54■□□□□ 0.88
TRUB1Q8WWH5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRUB1Q8WWH5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.54■□□□□ 0.88
TRUB1Q8WWH5 AL022069.1-201ENST00000568025 1636 ntBASIC20.54■□□□□ 0.88
TRUB1Q8WWH5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRUB1Q8WWH5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRUB1Q8WWH5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.54■□□□□ 0.88
TRUB1Q8WWH5 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.54■□□□□ 0.88
TRUB1Q8WWH5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
TRUB1Q8WWH5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRUB1Q8WWH5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRUB1Q8WWH5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TRUB1Q8WWH5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRUB1Q8WWH5 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB1Q8WWH5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB1Q8WWH5 AC092667.1-201ENST00000434301 2586 ntBASIC20.53■□□□□ 0.88
TRUB1Q8WWH5 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.53■□□□□ 0.88
TRUB1Q8WWH5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB1Q8WWH5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB1Q8WWH5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB1Q8WWH5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB1Q8WWH5 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB1Q8WWH5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB1Q8WWH5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB1Q8WWH5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.53■□□□□ 0.88
TRUB1Q8WWH5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.53■□□□□ 0.88
TRUB1Q8WWH5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB1Q8WWH5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.53■□□□□ 0.88
TRUB1Q8WWH5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB1Q8WWH5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB1Q8WWH5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRUB1Q8WWH5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TRUB1Q8WWH5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
TRUB1Q8WWH5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.52■□□□□ 0.88
TRUB1Q8WWH5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRUB1Q8WWH5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRUB1Q8WWH5 AL592295.1-201ENST00000400984 884 ntBASIC20.52■□□□□ 0.88
TRUB1Q8WWH5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRUB1Q8WWH5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.52■□□□□ 0.88
TRUB1Q8WWH5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
TRUB1Q8WWH5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.52■□□□□ 0.87
TRUB1Q8WWH5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
TRUB1Q8WWH5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRUB1Q8WWH5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRUB1Q8WWH5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRUB1Q8WWH5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRUB1Q8WWH5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRUB1Q8WWH5 RPS2P7-201ENST00000447334 885 ntBASIC20.51■□□□□ 0.87
TRUB1Q8WWH5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRUB1Q8WWH5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRUB1Q8WWH5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRUB1Q8WWH5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRUB1Q8WWH5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
TRUB1Q8WWH5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRUB1Q8WWH5 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRUB1Q8WWH5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TRUB1Q8WWH5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRUB1Q8WWH5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRUB1Q8WWH5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRUB1Q8WWH5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms