Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC14.59□□□□□ -0.07
SMIM11BQ8TCY0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM11BQ8TCY0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
SMIM11BQ8TCY0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SMIM11BQ8TCY0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM11BQ8TCY0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM11BQ8TCY0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM11BQ8TCY0 AC092053.2-201ENST00000640557 1818 ntBASIC14.59□□□□□ -0.07
SMIM11BQ8TCY0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM11BQ8TCY0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM11BQ8TCY0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 DUX4L13-201ENST00000554103 1267 ntBASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 DUX4L15-201ENST00000611059 1267 ntBASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 DUX4L23-201ENST00000615195 1269 ntBASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 DUX4L24-201ENST00000617576 1269 ntBASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 DUX4L22-201ENST00000618238 1269 ntBASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 DUX4L20-201ENST00000619712 1269 ntBASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 DUX4L21-201ENST00000622058 1269 ntBASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 DUX4L10-201ENST00000622460 1267 ntBASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 DUX4L25-201ENST00000624915 1269 ntBASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 FBXW4P1-201ENST00000426721 2239 ntBASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SMIM11BQ8TCY0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11BQ8TCY0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11BQ8TCY0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SMIM11BQ8TCY0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SMIM11BQ8TCY0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11BQ8TCY0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SMIM11BQ8TCY0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11BQ8TCY0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC14.57□□□□□ -0.08
SMIM11BQ8TCY0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SMIM11BQ8TCY0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SMIM11BQ8TCY0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11BQ8TCY0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC14.57□□□□□ -0.08
SMIM11BQ8TCY0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11BQ8TCY0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SMIM11BQ8TCY0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SMIM11BQ8TCY0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SMIM11BQ8TCY0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11BQ8TCY0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11BQ8TCY0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11BQ8TCY0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC14.56□□□□□ -0.08
SMIM11BQ8TCY0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC14.56□□□□□ -0.08
SMIM11BQ8TCY0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11BQ8TCY0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC14.56□□□□□ -0.08
SMIM11BQ8TCY0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11BQ8TCY0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
SMIM11BQ8TCY0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11BQ8TCY0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC14.56□□□□□ -0.08
SMIM11BQ8TCY0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC14.56□□□□□ -0.08
SMIM11BQ8TCY0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC14.56□□□□□ -0.08
SMIM11BQ8TCY0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11BQ8TCY0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SMIM11BQ8TCY0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11BQ8TCY0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11BQ8TCY0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11BQ8TCY0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11BQ8TCY0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC14.56□□□□□ -0.08
SMIM11BQ8TCY0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11BQ8TCY0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11BQ8TCY0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC14.55□□□□□ -0.08
SMIM11BQ8TCY0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SMIM11BQ8TCY0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11BQ8TCY0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC14.55□□□□□ -0.08
SMIM11BQ8TCY0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SMIM11BQ8TCY0 LINC01971-201ENST00000617888 1048 ntBASIC14.55□□□□□ -0.08
SMIM11BQ8TCY0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11BQ8TCY0 AL161729.1-201ENST00000604104 1402 ntBASIC14.55□□□□□ -0.08
SMIM11BQ8TCY0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC14.55□□□□□ -0.08
SMIM11BQ8TCY0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11BQ8TCY0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11BQ8TCY0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SMIM11BQ8TCY0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM11BQ8TCY0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM11BQ8TCY0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SMIM11BQ8TCY0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM11BQ8TCY0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM11BQ8TCY0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC14.54□□□□□ -0.08
SMIM11BQ8TCY0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM11BQ8TCY0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC14.54□□□□□ -0.08
SMIM11BQ8TCY0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM11BQ8TCY0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC14.54□□□□□ -0.08
SMIM11BQ8TCY0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM11BQ8TCY0 AC139530.1-201ENST00000575312 1977 ntBASIC14.54□□□□□ -0.08
SMIM11BQ8TCY0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms