Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC34.92■■■■□ 3.18
CD109Q6YHK3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC34.92■■■■□ 3.18
CD109Q6YHK3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
CD109Q6YHK3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
CD109Q6YHK3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC34.92■■■■□ 3.18
CD109Q6YHK3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC34.92■■■■□ 3.18
CD109Q6YHK3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC34.91■■■■□ 3.18
CD109Q6YHK3 DBI-210ENST00000542275 757 ntTSL 5 BASIC34.91■■■■□ 3.18
CD109Q6YHK3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC34.91■■■■□ 3.18
CD109Q6YHK3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC34.9■■■■□ 3.18
CD109Q6YHK3 AC006970.2-201ENST00000450065 779 ntBASIC34.9■■■■□ 3.18
CD109Q6YHK3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC34.9■■■■□ 3.18
CD109Q6YHK3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC34.9■■■■□ 3.18
CD109Q6YHK3 MIR6089-201ENST00000616698 64 ntBASIC34.9■■■■□ 3.18
CD109Q6YHK3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC34.9■■■■□ 3.18
CD109Q6YHK3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC34.9■■■■□ 3.18
CD109Q6YHK3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
CD109Q6YHK3 AC091060.1-201ENST00000623524 1766 ntBASIC34.9■■■■□ 3.18
CD109Q6YHK3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC34.9■■■■□ 3.18
CD109Q6YHK3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
CD109Q6YHK3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC34.89■■■■□ 3.18
CD109Q6YHK3 AC133637.1-201ENST00000624115 1537 ntBASIC34.89■■■■□ 3.18
CD109Q6YHK3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC34.89■■■■□ 3.18
CD109Q6YHK3 NCF1B-203ENST00000435988 1254 ntBASIC34.89■■■■□ 3.18
CD109Q6YHK3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC34.89■■■■□ 3.18
CD109Q6YHK3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC34.89■■■■□ 3.18
CD109Q6YHK3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
CD109Q6YHK3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC34.88■■■■□ 3.17
CD109Q6YHK3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
CD109Q6YHK3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC34.88■■■■□ 3.17
CD109Q6YHK3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC34.88■■■■□ 3.17
CD109Q6YHK3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
CD109Q6YHK3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC34.87■■■■□ 3.17
CD109Q6YHK3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC34.87■■■■□ 3.17
CD109Q6YHK3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC34.87■■■■□ 3.17
CD109Q6YHK3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
CD109Q6YHK3 OR2I1P-207ENST00000453522 948 ntBASIC34.86■■■■□ 3.17
CD109Q6YHK3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC34.86■■■■□ 3.17
CD109Q6YHK3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
CD109Q6YHK3 BID-214ENST00000617586 542 ntTSL 5 BASIC34.86■■■■□ 3.17
CD109Q6YHK3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
CD109Q6YHK3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
CD109Q6YHK3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
CD109Q6YHK3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CD109Q6YHK3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CD109Q6YHK3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CD109Q6YHK3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC34.84■■■■□ 3.17
CD109Q6YHK3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CD109Q6YHK3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC34.84■■■■□ 3.17
CD109Q6YHK3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC34.84■■■■□ 3.17
CD109Q6YHK3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
CD109Q6YHK3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC34.84■■■■□ 3.17
CD109Q6YHK3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CD109Q6YHK3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CD109Q6YHK3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC34.83■■■■□ 3.17
CD109Q6YHK3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
CD109Q6YHK3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC34.83■■■■□ 3.17
CD109Q6YHK3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
CD109Q6YHK3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC34.83■■■■□ 3.17
CD109Q6YHK3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC34.83■■■■□ 3.17
CD109Q6YHK3 CD99P1-205ENST00000527459 561 ntBASIC34.82■■■■□ 3.17
CD109Q6YHK3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC34.82■■■■□ 3.17
CD109Q6YHK3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC34.82■■■■□ 3.16
CD109Q6YHK3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
CD109Q6YHK3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC34.81■■■■□ 3.16
CD109Q6YHK3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC34.81■■■■□ 3.16
CD109Q6YHK3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC34.81■■■■□ 3.16
CD109Q6YHK3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CD109Q6YHK3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC34.81■■■■□ 3.16
CD109Q6YHK3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC34.81■■■■□ 3.16
CD109Q6YHK3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
CD109Q6YHK3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC34.8■■■■□ 3.16
CD109Q6YHK3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CD109Q6YHK3 AC142086.6-201ENST00000621154 1765 ntBASIC34.8■■■■□ 3.16
CD109Q6YHK3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
CD109Q6YHK3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC34.8■■■■□ 3.16
CD109Q6YHK3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
CD109Q6YHK3 TPRG1LP1-201ENST00000598702 760 ntBASIC34.8■■■■□ 3.16
CD109Q6YHK3 AL499627.2-201ENST00000606283 725 ntBASIC34.8■■■■□ 3.16
CD109Q6YHK3 AC105233.4-201ENST00000642045 216 ntBASIC34.8■■■■□ 3.16
CD109Q6YHK3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC34.79■■■■□ 3.16
CD109Q6YHK3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC34.79■■■■□ 3.16
CD109Q6YHK3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC34.79■■■■□ 3.16
CD109Q6YHK3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC34.79■■■■□ 3.16
CD109Q6YHK3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC34.78■■■■□ 3.16
CD109Q6YHK3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC34.78■■■■□ 3.16
CD109Q6YHK3 AP004607.4-201ENST00000530158 1459 ntBASIC34.78■■■■□ 3.16
CD109Q6YHK3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC34.78■■■■□ 3.16
CD109Q6YHK3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC34.78■■■■□ 3.16
CD109Q6YHK3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC34.77■■■■□ 3.16
CD109Q6YHK3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
CD109Q6YHK3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
CD109Q6YHK3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC34.77■■■■□ 3.16
CD109Q6YHK3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC34.77■■■■□ 3.16
CD109Q6YHK3 MIR663A-201ENST00000385250 93 ntBASIC34.77■■■■□ 3.16
CD109Q6YHK3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC34.77■■■■□ 3.16
CD109Q6YHK3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC34.77■■■■□ 3.16
CD109Q6YHK3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC34.77■■■■□ 3.16
CD109Q6YHK3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC34.77■■■■□ 3.16
CD109Q6YHK3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC34.77■■■■□ 3.16
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms