Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPP38P78345 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
RPP38P78345 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPP38P78345 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.17■□□□□ 0.98
RPP38P78345 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPP38P78345 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.17■□□□□ 0.98
RPP38P78345 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.17■□□□□ 0.98
RPP38P78345 AC010997.5-201ENST00000609182 354 ntBASIC21.17■□□□□ 0.98
RPP38P78345 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPP38P78345 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RPP38P78345 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RPP38P78345 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPP38P78345 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.17■□□□□ 0.98
RPP38P78345 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.17■□□□□ 0.98
RPP38P78345 AC233723.2-201ENST00000623798 2106 ntBASIC21.17■□□□□ 0.98
RPP38P78345 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPP38P78345 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RPP38P78345 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPP38P78345 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPP38P78345 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPP38P78345 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RPP38P78345 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RPP38P78345 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPP38P78345 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.16■□□□□ 0.98
RPP38P78345 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPP38P78345 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPP38P78345 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPP38P78345 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
RPP38P78345 AC004448.1-201ENST00000458332 883 ntBASIC21.16■□□□□ 0.98
RPP38P78345 SNX5-217ENST00000606557 1087 ntBASIC21.16■□□□□ 0.98
RPP38P78345 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPP38P78345 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.16■□□□□ 0.98
RPP38P78345 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP38P78345 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP38P78345 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP38P78345 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
RPP38P78345 AL356441.2-201ENST00000443009 864 ntBASIC21.15■□□□□ 0.98
RPP38P78345 UNC93B8-201ENST00000511903 705 ntBASIC21.15■□□□□ 0.98
RPP38P78345 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.15■□□□□ 0.98
RPP38P78345 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.15■□□□□ 0.98
RPP38P78345 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RPP38P78345 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP38P78345 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RPP38P78345 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
RPP38P78345 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RPP38P78345 EP400NL-214ENST00000641289 2402 ntBASIC21.14■□□□□ 0.97
RPP38P78345 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPP38P78345 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.14■□□□□ 0.97
RPP38P78345 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.14■□□□□ 0.97
RPP38P78345 MIR6722-201ENST00000617286 78 ntBASIC21.14■□□□□ 0.97
RPP38P78345 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.14■□□□□ 0.97
RPP38P78345 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPP38P78345 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPP38P78345 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RPP38P78345 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
RPP38P78345 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RPP38P78345 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RPP38P78345 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPP38P78345 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RPP38P78345 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RPP38P78345 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPP38P78345 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPP38P78345 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPP38P78345 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RPP38P78345 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RPP38P78345 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RPP38P78345 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.13■□□□□ 0.97
RPP38P78345 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.13■□□□□ 0.97
RPP38P78345 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPP38P78345 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPP38P78345 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RPP38P78345 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RPP38P78345 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPP38P78345 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPP38P78345 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPP38P78345 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPP38P78345 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RPP38P78345 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.12■□□□□ 0.97
RPP38P78345 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPP38P78345 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPP38P78345 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.12■□□□□ 0.97
RPP38P78345 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RPP38P78345 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.12■□□□□ 0.97
RPP38P78345 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPP38P78345 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.12■□□□□ 0.97
RPP38P78345 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPP38P78345 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RPP38P78345 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPP38P78345 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPP38P78345 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPP38P78345 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RPP38P78345 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPP38P78345 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPP38P78345 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPP38P78345 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RPP38P78345 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPP38P78345 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPP38P78345 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPP38P78345 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.11■□□□□ 0.97
RPP38P78345 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms