Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.87■■□□□ 1.09
COL5A1P20908 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.87■■□□□ 1.09
COL5A1P20908 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL5A1P20908 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.87■■□□□ 1.09
COL5A1P20908 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL5A1P20908 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL5A1P20908 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
COL5A1P20908 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL5A1P20908 AC141586.4-201ENST00000624558 1573 ntBASIC21.87■■□□□ 1.09
COL5A1P20908 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.87■■□□□ 1.09
COL5A1P20908 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL5A1P20908 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.87■■□□□ 1.09
COL5A1P20908 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL5A1P20908 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.87■■□□□ 1.09
COL5A1P20908 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.87■■□□□ 1.09
COL5A1P20908 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
COL5A1P20908 KRT18P14-201ENST00000534205 1250 ntBASIC21.87■■□□□ 1.09
COL5A1P20908 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL5A1P20908 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.87■■□□□ 1.09
COL5A1P20908 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.86■■□□□ 1.09
COL5A1P20908 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL5A1P20908 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL5A1P20908 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL5A1P20908 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.86■■□□□ 1.09
COL5A1P20908 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.86■■□□□ 1.09
COL5A1P20908 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.86■■□□□ 1.09
COL5A1P20908 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.86■■□□□ 1.09
COL5A1P20908 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.86■■□□□ 1.09
COL5A1P20908 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL5A1P20908 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
COL5A1P20908 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
COL5A1P20908 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL5A1P20908 CCDC92B-201ENST00000575506 885 ntBASIC21.85■■□□□ 1.09
COL5A1P20908 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
COL5A1P20908 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL5A1P20908 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL5A1P20908 AC020928.2-201ENST00000588717 2197 ntBASIC21.85■■□□□ 1.09
COL5A1P20908 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL5A1P20908 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.85■■□□□ 1.09
COL5A1P20908 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
COL5A1P20908 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL5A1P20908 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL5A1P20908 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
COL5A1P20908 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.84■■□□□ 1.09
COL5A1P20908 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL5A1P20908 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.84■■□□□ 1.09
COL5A1P20908 TERF1P2-201ENST00000583350 1212 ntBASIC21.84■■□□□ 1.09
COL5A1P20908 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.84■■□□□ 1.09
COL5A1P20908 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
COL5A1P20908 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL5A1P20908 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL5A1P20908 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.84■■□□□ 1.09
COL5A1P20908 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL5A1P20908 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.83■■□□□ 1.09
COL5A1P20908 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.83■■□□□ 1.09
COL5A1P20908 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL5A1P20908 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
COL5A1P20908 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL5A1P20908 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
COL5A1P20908 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL5A1P20908 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
COL5A1P20908 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL5A1P20908 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.83■■□□□ 1.08
COL5A1P20908 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
COL5A1P20908 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL5A1P20908 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL5A1P20908 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
COL5A1P20908 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.82■■□□□ 1.08
COL5A1P20908 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.82■■□□□ 1.08
COL5A1P20908 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL5A1P20908 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL5A1P20908 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL5A1P20908 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL5A1P20908 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.81■■□□□ 1.08
COL5A1P20908 ALDH1A3-203ENST00000557963 1670 ntBASIC21.81■■□□□ 1.08
COL5A1P20908 ID1-201ENST00000376105 1233 ntBASIC21.81■■□□□ 1.08
COL5A1P20908 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.81■■□□□ 1.08
COL5A1P20908 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
COL5A1P20908 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.81■■□□□ 1.08
COL5A1P20908 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL5A1P20908 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.81■■□□□ 1.08
COL5A1P20908 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL5A1P20908 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.81■■□□□ 1.08
COL5A1P20908 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL5A1P20908 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL5A1P20908 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.8■■□□□ 1.08
COL5A1P20908 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL5A1P20908 OR2I1P-207ENST00000453522 948 ntBASIC21.8■■□□□ 1.08
COL5A1P20908 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL5A1P20908 MIR6084-201ENST00000622012 110 ntBASIC21.8■■□□□ 1.08
COL5A1P20908 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL5A1P20908 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL5A1P20908 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL5A1P20908 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.8■■□□□ 1.08
COL5A1P20908 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL5A1P20908 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
COL5A1P20908 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.8■■□□□ 1.08
COL5A1P20908 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.8■■□□□ 1.08
COL5A1P20908 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL5A1P20908 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms