Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF223E7ERA6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF223E7ERA6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF223E7ERA6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF223E7ERA6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF223E7ERA6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
RNF223E7ERA6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF223E7ERA6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RNF223E7ERA6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF223E7ERA6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF223E7ERA6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF223E7ERA6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNF223E7ERA6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF223E7ERA6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF223E7ERA6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF223E7ERA6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF223E7ERA6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.75■□□□□ 0.59
RNF223E7ERA6 NTF6G-201ENST00000591094 616 ntBASIC18.75■□□□□ 0.59
RNF223E7ERA6 AL354811.1-201ENST00000610286 706 ntBASIC18.75■□□□□ 0.59
RNF223E7ERA6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF223E7ERA6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RNF223E7ERA6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF223E7ERA6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF223E7ERA6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF223E7ERA6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF223E7ERA6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF223E7ERA6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF223E7ERA6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF223E7ERA6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF223E7ERA6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF223E7ERA6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF223E7ERA6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF223E7ERA6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF223E7ERA6 AL161729.1-201ENST00000604104 1402 ntBASIC18.74■□□□□ 0.59
RNF223E7ERA6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF223E7ERA6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF223E7ERA6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF223E7ERA6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF223E7ERA6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF223E7ERA6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF223E7ERA6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF223E7ERA6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RNF223E7ERA6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF223E7ERA6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF223E7ERA6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF223E7ERA6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF223E7ERA6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF223E7ERA6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF223E7ERA6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF223E7ERA6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF223E7ERA6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF223E7ERA6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF223E7ERA6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF223E7ERA6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF223E7ERA6 KRT18P14-201ENST00000534205 1250 ntBASIC18.72■□□□□ 0.59
RNF223E7ERA6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF223E7ERA6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF223E7ERA6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF223E7ERA6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RNF223E7ERA6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RNF223E7ERA6 ALDH1A3-203ENST00000557963 1670 ntBASIC18.72■□□□□ 0.59
RNF223E7ERA6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF223E7ERA6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF223E7ERA6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF223E7ERA6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF223E7ERA6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RNF223E7ERA6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF223E7ERA6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF223E7ERA6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF223E7ERA6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF223E7ERA6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.71■□□□□ 0.59
RNF223E7ERA6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF223E7ERA6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF223E7ERA6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF223E7ERA6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF223E7ERA6 HLA-L-211ENST00000482052 1765 ntBASIC18.7■□□□□ 0.58
RNF223E7ERA6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF223E7ERA6 AC133637.1-201ENST00000624115 1537 ntBASIC18.7■□□□□ 0.58
RNF223E7ERA6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF223E7ERA6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF223E7ERA6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF223E7ERA6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF223E7ERA6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF223E7ERA6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF223E7ERA6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF223E7ERA6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF223E7ERA6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF223E7ERA6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF223E7ERA6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF223E7ERA6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF223E7ERA6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF223E7ERA6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF223E7ERA6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF223E7ERA6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF223E7ERA6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF223E7ERA6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF223E7ERA6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF223E7ERA6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF223E7ERA6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
RNF223E7ERA6 LINC02228-203ENST00000641970 1355 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms