Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 AL139385.1-201ENST00000611744 3272 ntBASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 AC118758.2-201ENST00000614242 2813 ntBASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 Z97180.1-201ENST00000445173 988 ntBASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 AL157813.1-201ENST00000612996 587 ntBASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PARPBPQ9NWS1 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 AC239868.1-201ENST00000369385 493 ntBASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 AC006335.1-201ENST00000445200 547 ntBASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 AC027612.1-201ENST00000445234 2395 ntBASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 CCT8L1P-201ENST00000465400 1674 ntBASIC12.75□□□□□ -0.37
PARPBPQ9NWS1 RN7SL530P-201ENST00000485097 298 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms