Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 AC233724.13-201ENST00000598383 410 ntBASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 AC008825.2-201ENST00000603374 718 ntBASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 AC067750.1-201ENST00000608826 6545 ntBASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 AC092117.1-201ENST00000621230 3250 ntBASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 AC009474.1-201ENST00000455096 1565 ntBASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHAMP1Q96JM3 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 SUPT20HL1-201ENST00000436466 2618 ntBASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 CNN2P10-201ENST00000443067 918 ntBASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 AC007389.4-201ENST00000454674 793 ntBASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 DUX4L46-201ENST00000566845 751 ntBASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 AC005962.1-201ENST00000584100 773 ntBASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 AC025183.3-201ENST00000623526 1482 ntBASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CHAMP1Q96JM3 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 ELK2AP-201ENST00000392510 1007 ntBASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 AC003686.1-201ENST00000550956 1034 ntBASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 AL512310.5-201ENST00000551999 515 ntBASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 AC124068.2-201ENST00000569473 1109 ntBASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 BTNL10-201ENST00000595971 695 ntBASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 ZACNP1-201ENST00000612259 710 ntBASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 GPR182-203ENST00000622922 591 ntBASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms