Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CLDN20P56880 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CLDN20P56880 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.05□□□□□ -0.32
CLDN20P56880 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 AC012617.1-204ENST00000586340 2305 ntBASIC13.05□□□□□ -0.32
CLDN20P56880 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN20P56880 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
CLDN20P56880 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN20P56880 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CLDN20P56880 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
CLDN20P56880 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
CLDN20P56880 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CLDN20P56880 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CLDN20P56880 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CLDN20P56880 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN20P56880 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN20P56880 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CLDN20P56880 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN20P56880 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.04□□□□□ -0.32
CLDN20P56880 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 XBP1P1-201ENST00000436573 652 ntBASIC13.04□□□□□ -0.32
CLDN20P56880 OR2R1P-201ENST00000441404 914 ntBASIC13.04□□□□□ -0.32
CLDN20P56880 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN20P56880 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.04□□□□□ -0.32
CLDN20P56880 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN20P56880 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN20P56880 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.04□□□□□ -0.32
CLDN20P56880 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.04□□□□□ -0.32
CLDN20P56880 AC124068.2-201ENST00000569473 1109 ntBASIC13.04□□□□□ -0.32
CLDN20P56880 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.04□□□□□ -0.32
CLDN20P56880 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.04□□□□□ -0.32
CLDN20P56880 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN20P56880 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.04□□□□□ -0.32
CLDN20P56880 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CLDN20P56880 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.04□□□□□ -0.32
CLDN20P56880 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CLDN20P56880 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
CLDN20P56880 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.04□□□□□ -0.32
CLDN20P56880 AL157813.1-201ENST00000612996 587 ntBASIC13.04□□□□□ -0.32
CLDN20P56880 AC100757.4-201ENST00000626934 759 ntBASIC13.04□□□□□ -0.32
CLDN20P56880 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CLDN20P56880 AL157791.1-201ENST00000553667 1699 ntBASIC13.04□□□□□ -0.32
CLDN20P56880 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN20P56880 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CLDN20P56880 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN20P56880 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CLDN20P56880 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN20P56880 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN20P56880 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN20P56880 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN20P56880 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
CLDN20P56880 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN20P56880 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN20P56880 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN20P56880 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN20P56880 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN20P56880 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CLDN20P56880 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CLDN20P56880 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CLDN20P56880 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
CLDN20P56880 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN20P56880 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN20P56880 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN20P56880 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN20P56880 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN20P56880 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CLDN20P56880 MIR769-201ENST00000390225 118 ntBASIC13.03□□□□□ -0.32
CLDN20P56880 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CLDN20P56880 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN20P56880 AL008707.1-201ENST00000422498 534 ntBASIC13.03□□□□□ -0.32
CLDN20P56880 AL161932.2-201ENST00000435436 679 ntBASIC13.03□□□□□ -0.32
CLDN20P56880 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN20P56880 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.03□□□□□ -0.32
CLDN20P56880 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN20P56880 RN7SL11P-201ENST00000471305 293 ntBASIC13.03□□□□□ -0.32
CLDN20P56880 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.03□□□□□ -0.32
CLDN20P56880 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
CLDN20P56880 PGAM1P5-201ENST00000548011 764 ntBASIC13.03□□□□□ -0.32
CLDN20P56880 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms