Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDGFBP01127 AC018529.2-202ENST00000611482 3087 ntBASIC13.98□□□□□ -0.17
PDGFBP01127 AC007326.2-201ENST00000624224 7579 ntBASIC13.98□□□□□ -0.17
PDGFBP01127 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
PDGFBP01127 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PDGFBP01127 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.97□□□□□ -0.17
PDGFBP01127 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
PDGFBP01127 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.97□□□□□ -0.17
PDGFBP01127 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 AL365209.1-201ENST00000624418 6473 ntBASIC13.97□□□□□ -0.17
PDGFBP01127 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PDGFBP01127 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC13.97□□□□□ -0.17
PDGFBP01127 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.97□□□□□ -0.17
PDGFBP01127 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 WDR54-202ENST00000409791 854 ntTSL 3 BASIC13.97□□□□□ -0.17
PDGFBP01127 RPSAP6-201ENST00000417882 882 ntBASIC13.97□□□□□ -0.17
PDGFBP01127 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PDGFBP01127 AF186996.6-201ENST00000485294 149 ntBASIC13.97□□□□□ -0.17
PDGFBP01127 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC13.97□□□□□ -0.17
PDGFBP01127 SRPK2P-201ENST00000523408 1100 ntBASIC13.97□□□□□ -0.17
PDGFBP01127 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC13.97□□□□□ -0.17
PDGFBP01127 AC091691.1-201ENST00000583587 1018 ntBASIC13.97□□□□□ -0.17
PDGFBP01127 RPS5-205ENST00000598495 800 ntTSL 3 BASIC13.97□□□□□ -0.17
PDGFBP01127 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
PDGFBP01127 AC139100.2-201ENST00000616901 662 ntBASIC13.97□□□□□ -0.17
PDGFBP01127 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC13.97□□□□□ -0.17
PDGFBP01127 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.97□□□□□ -0.17
PDGFBP01127 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.97□□□□□ -0.17
PDGFBP01127 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
PDGFBP01127 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC13.97□□□□□ -0.17
PDGFBP01127 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDGFBP01127 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PDGFBP01127 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.97□□□□□ -0.17
PDGFBP01127 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
PDGFBP01127 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PDGFBP01127 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC13.96□□□□□ -0.17
PDGFBP01127 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDGFBP01127 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.96□□□□□ -0.17
PDGFBP01127 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PDGFBP01127 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDGFBP01127 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDGFBP01127 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.96□□□□□ -0.17
PDGFBP01127 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PDGFBP01127 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
PDGFBP01127 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.96□□□□□ -0.17
PDGFBP01127 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PDGFBP01127 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC13.96□□□□□ -0.17
PDGFBP01127 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.96□□□□□ -0.17
PDGFBP01127 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.96□□□□□ -0.17
PDGFBP01127 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC13.96□□□□□ -0.17
PDGFBP01127 OR7E12P-201ENST00000344740 973 ntBASIC13.96□□□□□ -0.17
PDGFBP01127 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDGFBP01127 RBM14-205ENST00000443702 732 ntTSL 3 BASIC13.96□□□□□ -0.17
PDGFBP01127 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC13.96□□□□□ -0.17
PDGFBP01127 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC13.96□□□□□ -0.17
PDGFBP01127 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC13.96□□□□□ -0.17
PDGFBP01127 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC13.96□□□□□ -0.17
PDGFBP01127 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC13.96□□□□□ -0.17
PDGFBP01127 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PDGFBP01127 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC13.96□□□□□ -0.17
PDGFBP01127 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC13.96□□□□□ -0.17
PDGFBP01127 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC13.96□□□□□ -0.17
PDGFBP01127 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC13.96□□□□□ -0.17
PDGFBP01127 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.96□□□□□ -0.17
PDGFBP01127 AC022001.3-201ENST00000606330 596 ntBASIC13.96□□□□□ -0.17
PDGFBP01127 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC13.96□□□□□ -0.17
PDGFBP01127 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PDGFBP01127 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.96□□□□□ -0.17
PDGFBP01127 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDGFBP01127 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PDGFBP01127 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.96□□□□□ -0.17
PDGFBP01127 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDGFBP01127 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDGFBP01127 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDGFBP01127 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
PDGFBP01127 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.96□□□□□ -0.17
PDGFBP01127 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms