Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CASP9P55211 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.48□□□□□ -0.25
CASP9P55211 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.48□□□□□ -0.25
CASP9P55211 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.48□□□□□ -0.25
CASP9P55211 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
CASP9P55211 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.48□□□□□ -0.25
CASP9P55211 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CASP9P55211 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 MIR1909-201ENST00000411312 80 ntBASIC13.48□□□□□ -0.25
CASP9P55211 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.48□□□□□ -0.25
CASP9P55211 AC234783.1-201ENST00000441761 496 ntBASIC13.48□□□□□ -0.25
CASP9P55211 AC022494.1-201ENST00000466044 728 ntBASIC13.48□□□□□ -0.25
CASP9P55211 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.48□□□□□ -0.25
CASP9P55211 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.48□□□□□ -0.25
CASP9P55211 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.48□□□□□ -0.25
CASP9P55211 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.48□□□□□ -0.25
CASP9P55211 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.48□□□□□ -0.25
CASP9P55211 AC009955.4-201ENST00000597192 544 ntBASIC13.48□□□□□ -0.25
CASP9P55211 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.48□□□□□ -0.25
CASP9P55211 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.48□□□□□ -0.25
CASP9P55211 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.48□□□□□ -0.25
CASP9P55211 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CASP9P55211 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CASP9P55211 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CASP9P55211 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.48□□□□□ -0.25
CASP9P55211 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.48□□□□□ -0.25
CASP9P55211 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CASP9P55211 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
CASP9P55211 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CASP9P55211 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.48□□□□□ -0.25
CASP9P55211 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.47□□□□□ -0.25
CASP9P55211 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CASP9P55211 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.47□□□□□ -0.25
CASP9P55211 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CASP9P55211 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CASP9P55211 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.47□□□□□ -0.25
CASP9P55211 AC068760.1-201ENST00000493579 1953 ntBASIC13.47□□□□□ -0.25
CASP9P55211 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CASP9P55211 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CASP9P55211 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CASP9P55211 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CASP9P55211 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.47□□□□□ -0.25
CASP9P55211 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CASP9P55211 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CASP9P55211 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.47□□□□□ -0.25
CASP9P55211 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CASP9P55211 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CASP9P55211 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CASP9P55211 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CASP9P55211 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CASP9P55211 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CASP9P55211 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CASP9P55211 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CASP9P55211 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.47□□□□□ -0.25
CASP9P55211 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CASP9P55211 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CASP9P55211 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CASP9P55211 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.47□□□□□ -0.25
CASP9P55211 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.47□□□□□ -0.25
CASP9P55211 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CASP9P55211 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CASP9P55211 RPS2P32-201ENST00000439199 892 ntBASIC13.47□□□□□ -0.25
CASP9P55211 ST13P19-201ENST00000442505 1124 ntBASIC13.47□□□□□ -0.25
CASP9P55211 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CASP9P55211 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.47□□□□□ -0.25
CASP9P55211 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.47□□□□□ -0.25
CASP9P55211 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.47□□□□□ -0.25
CASP9P55211 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.47□□□□□ -0.25
CASP9P55211 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
CASP9P55211 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.47□□□□□ -0.25
CASP9P55211 AC106886.1-201ENST00000568660 600 ntBASIC13.47□□□□□ -0.25
CASP9P55211 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CASP9P55211 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CASP9P55211 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CASP9P55211 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.47□□□□□ -0.25
CASP9P55211 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.47□□□□□ -0.25
CASP9P55211 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms