Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HOXA6P31267 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXA6P31267 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC13.73□□□□□ -0.21
HOXA6P31267 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HOXA6P31267 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXA6P31267 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
HOXA6P31267 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HOXA6P31267 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXA6P31267 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.73□□□□□ -0.21
HOXA6P31267 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.73□□□□□ -0.21
HOXA6P31267 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
HOXA6P31267 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HOXA6P31267 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.73□□□□□ -0.21
HOXA6P31267 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXA6P31267 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXA6P31267 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HOXA6P31267 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
HOXA6P31267 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HOXA6P31267 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 AC105917.1-201ENST00000506637 2539 ntBASIC13.72□□□□□ -0.21
HOXA6P31267 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC13.72□□□□□ -0.21
HOXA6P31267 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
HOXA6P31267 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HOXA6P31267 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC13.72□□□□□ -0.21
HOXA6P31267 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HOXA6P31267 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.72□□□□□ -0.21
HOXA6P31267 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 MIR339-201ENST00000362153 94 ntBASIC13.72□□□□□ -0.21
HOXA6P31267 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC13.72□□□□□ -0.21
HOXA6P31267 MIR632-201ENST00000385193 94 ntBASIC13.72□□□□□ -0.21
HOXA6P31267 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC13.72□□□□□ -0.21
HOXA6P31267 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC13.72□□□□□ -0.21
HOXA6P31267 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC13.72□□□□□ -0.21
HOXA6P31267 AC099328.1-201ENST00000498809 1030 ntBASIC13.72□□□□□ -0.21
HOXA6P31267 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC13.72□□□□□ -0.21
HOXA6P31267 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC13.72□□□□□ -0.21
HOXA6P31267 AC010202.1-201ENST00000551181 405 ntBASIC13.72□□□□□ -0.21
HOXA6P31267 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC13.72□□□□□ -0.21
HOXA6P31267 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC13.72□□□□□ -0.21
HOXA6P31267 KF455155.1-201ENST00000604493 303 ntBASIC13.72□□□□□ -0.21
HOXA6P31267 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HOXA6P31267 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HOXA6P31267 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HOXA6P31267 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
HOXA6P31267 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.72□□□□□ -0.21
HOXA6P31267 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HOXA6P31267 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.72□□□□□ -0.21
HOXA6P31267 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 KRT8P38-201ENST00000441370 1430 ntBASIC13.72□□□□□ -0.21
HOXA6P31267 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.72□□□□□ -0.21
HOXA6P31267 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXA6P31267 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HOXA6P31267 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXA6P31267 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXA6P31267 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC13.71□□□□□ -0.21
HOXA6P31267 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXA6P31267 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXA6P31267 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HOXA6P31267 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.71□□□□□ -0.21
HOXA6P31267 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXA6P31267 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
HOXA6P31267 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXA6P31267 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXA6P31267 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXA6P31267 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HOXA6P31267 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXA6P31267 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXA6P31267 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXA6P31267 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HOXA6P31267 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.71□□□□□ -0.21
HOXA6P31267 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.71□□□□□ -0.21
HOXA6P31267 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXA6P31267 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
HOXA6P31267 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXA6P31267 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.71□□□□□ -0.21
HOXA6P31267 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms