Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CHGBP05060 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHGBP05060 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CHGBP05060 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHGBP05060 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC16.91■□□□□ 0.3
CHGBP05060 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHGBP05060 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CHGBP05060 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHGBP05060 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHGBP05060 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC16.9■□□□□ 0.3
CHGBP05060 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC16.9■□□□□ 0.3
CHGBP05060 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CHGBP05060 TBC1D27-202ENST00000424239 1573 ntBASIC16.9■□□□□ 0.3
CHGBP05060 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CHGBP05060 AC138761.6-201ENST00000583997 1423 ntBASIC16.9■□□□□ 0.3
CHGBP05060 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CHGBP05060 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.9■□□□□ 0.3
CHGBP05060 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 PYY2-201ENST00000315776 282 ntBASIC16.9■□□□□ 0.3
CHGBP05060 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.9■□□□□ 0.3
CHGBP05060 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.9■□□□□ 0.3
CHGBP05060 AC098934.1-203ENST00000442868 1262 ntBASIC16.9■□□□□ 0.3
CHGBP05060 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
CHGBP05060 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.9■□□□□ 0.3
CHGBP05060 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.9■□□□□ 0.3
CHGBP05060 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC16.9■□□□□ 0.3
CHGBP05060 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.9■□□□□ 0.3
CHGBP05060 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.9■□□□□ 0.3
CHGBP05060 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHGBP05060 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.9■□□□□ 0.3
CHGBP05060 AC092171.5-201ENST00000608012 942 ntBASIC16.9■□□□□ 0.3
CHGBP05060 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.9■□□□□ 0.3
CHGBP05060 AP001184.1-201ENST00000637936 376 ntBASIC16.9■□□□□ 0.3
CHGBP05060 AC105206.1-202ENST00000314927 2368 ntBASIC16.9■□□□□ 0.3
CHGBP05060 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC16.9■□□□□ 0.3
CHGBP05060 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
CHGBP05060 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CHGBP05060 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CHGBP05060 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHGBP05060 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHGBP05060 GOLGA8UP-201ENST00000527159 1755 ntBASIC16.89■□□□□ 0.3
CHGBP05060 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHGBP05060 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.89■□□□□ 0.3
CHGBP05060 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC16.89■□□□□ 0.29
CHGBP05060 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC16.89■□□□□ 0.29
CHGBP05060 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHGBP05060 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CHGBP05060 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CHGBP05060 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.89■□□□□ 0.29
CHGBP05060 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.89■□□□□ 0.29
CHGBP05060 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 AC092506.1-202ENST00000401022 528 ntBASIC16.89■□□□□ 0.29
CHGBP05060 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.89■□□□□ 0.29
CHGBP05060 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 PPP1R2P4-201ENST00000424051 595 ntBASIC16.89■□□□□ 0.29
CHGBP05060 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.89■□□□□ 0.29
CHGBP05060 AC078991.1-201ENST00000437297 610 ntBASIC16.89■□□□□ 0.29
CHGBP05060 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHGBP05060 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.89■□□□□ 0.29
CHGBP05060 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.89■□□□□ 0.29
CHGBP05060 AC007952.4-201ENST00000573866 637 ntBASIC16.89■□□□□ 0.29
CHGBP05060 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHGBP05060 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.89■□□□□ 0.29
CHGBP05060 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.89■□□□□ 0.29
CHGBP05060 AC087045.2-201ENST00000606279 1003 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms