Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 AP000911.2-201ENST00000534330 502 ntBASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 AC067931.2-201ENST00000623655 2003 ntBASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 GRPEL2P1-201ENST00000453145 339 ntBASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 IGHV3-37-201ENST00000518544 340 ntBASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 AC009145.4-201ENST00000625119 1294 ntBASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 AC090502.4-201ENST00000551714 1386 ntBASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 AC232323.1-201ENST00000540724 2099 ntBASIC16.38■□□□□ 0.21
CTDP1Q9Y5B0 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms