Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PHF3Q92576 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.78□□□□□ -0.36
PHF3Q92576 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
PHF3Q92576 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.78□□□□□ -0.36
PHF3Q92576 AC114501.1-201ENST00000445949 172 ntBASIC12.78□□□□□ -0.36
PHF3Q92576 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC12.78□□□□□ -0.36
PHF3Q92576 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.78□□□□□ -0.36
PHF3Q92576 AC093752.3-201ENST00000567343 901 ntBASIC12.78□□□□□ -0.36
PHF3Q92576 NUDT4P2-201ENST00000578341 546 ntBASIC12.78□□□□□ -0.36
PHF3Q92576 MIR4649-201ENST00000582839 64 ntBASIC12.78□□□□□ -0.36
PHF3Q92576 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.78□□□□□ -0.36
PHF3Q92576 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PHF3Q92576 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.78□□□□□ -0.36
PHF3Q92576 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
PHF3Q92576 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PHF3Q92576 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PHF3Q92576 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.78□□□□□ -0.36
PHF3Q92576 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.78□□□□□ -0.36
PHF3Q92576 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC12.78□□□□□ -0.36
PHF3Q92576 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.78□□□□□ -0.36
PHF3Q92576 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PHF3Q92576 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PHF3Q92576 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PHF3Q92576 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 AL022313.4-201ENST00000562756 2046 ntBASIC12.78□□□□□ -0.36
PHF3Q92576 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
PHF3Q92576 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
PHF3Q92576 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.78□□□□□ -0.36
PHF3Q92576 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.78□□□□□ -0.36
PHF3Q92576 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PHF3Q92576 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHF3Q92576 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC12.78□□□□□ -0.36
PHF3Q92576 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.78□□□□□ -0.36
PHF3Q92576 AC090502.4-201ENST00000551714 1386 ntBASIC12.77□□□□□ -0.36
PHF3Q92576 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.77□□□□□ -0.36
PHF3Q92576 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PHF3Q92576 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
PHF3Q92576 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PHF3Q92576 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.77□□□□□ -0.36
PHF3Q92576 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.77□□□□□ -0.36
PHF3Q92576 AC073869.1-201ENST00000415574 2762 ntBASIC12.77□□□□□ -0.36
PHF3Q92576 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PHF3Q92576 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PHF3Q92576 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
PHF3Q92576 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PHF3Q92576 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PHF3Q92576 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.36
PHF3Q92576 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PHF3Q92576 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PHF3Q92576 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PHF3Q92576 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.77□□□□□ -0.37
PHF3Q92576 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PHF3Q92576 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
PHF3Q92576 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PHF3Q92576 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PHF3Q92576 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PHF3Q92576 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PHF3Q92576 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PHF3Q92576 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
PHF3Q92576 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.77□□□□□ -0.37
PHF3Q92576 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.77□□□□□ -0.37
PHF3Q92576 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC12.77□□□□□ -0.37
PHF3Q92576 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
PHF3Q92576 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
PHF3Q92576 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.77□□□□□ -0.37
PHF3Q92576 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PHF3Q92576 MIR3180-2-201ENST00000581748 88 ntBASIC12.77□□□□□ -0.37
PHF3Q92576 AC005041.3-201ENST00000606287 649 ntBASIC12.77□□□□□ -0.37
PHF3Q92576 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PHF3Q92576 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
PHF3Q92576 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PHF3Q92576 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PHF3Q92576 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
PHF3Q92576 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.77□□□□□ -0.37
PHF3Q92576 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.77□□□□□ -0.37
PHF3Q92576 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.77□□□□□ -0.37
PHF3Q92576 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PHF3Q92576 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms