Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CTGFP29279 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CTGFP29279 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTGFP29279 SFPQP1-201ENST00000446621 1786 ntBASIC15.52■□□□□ 0.08
CTGFP29279 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CTGFP29279 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC15.52■□□□□ 0.08
CTGFP29279 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CTGFP29279 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTGFP29279 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTGFP29279 FGD5P1-202ENST00000614866 2498 ntBASIC15.52■□□□□ 0.08
CTGFP29279 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTGFP29279 AP001267.2-201ENST00000532619 2086 ntBASIC15.52■□□□□ 0.08
CTGFP29279 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CTGFP29279 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC15.52■□□□□ 0.08
CTGFP29279 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CTGFP29279 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTGFP29279 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTGFP29279 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CTGFP29279 SDCBP2P1-201ENST00000416115 614 ntBASIC15.52■□□□□ 0.08
CTGFP29279 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC15.52■□□□□ 0.08
CTGFP29279 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC15.52■□□□□ 0.08
CTGFP29279 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC15.52■□□□□ 0.08
CTGFP29279 MTHFD2P7-201ENST00000483867 983 ntBASIC15.52■□□□□ 0.08
CTGFP29279 CETN3-205ENST00000522842 664 ntTSL 2 BASIC15.52■□□□□ 0.08
CTGFP29279 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC15.52■□□□□ 0.08
CTGFP29279 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CTGFP29279 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC15.52■□□□□ 0.08
CTGFP29279 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CTGFP29279 TPST2P1-201ENST00000564073 1102 ntBASIC15.52■□□□□ 0.08
CTGFP29279 NAT9-219ENST00000582524 573 ntTSL 4 BASIC15.52■□□□□ 0.08
CTGFP29279 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC15.52■□□□□ 0.08
CTGFP29279 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CTGFP29279 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CTGFP29279 AL139424.3-202ENST00000641619 917 ntBASIC15.52■□□□□ 0.08
CTGFP29279 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CTGFP29279 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.52■□□□□ 0.08
CTGFP29279 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CTGFP29279 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CTGFP29279 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTGFP29279 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTGFP29279 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC15.52■□□□□ 0.07
CTGFP29279 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.52■□□□□ 0.07
CTGFP29279 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CTGFP29279 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTGFP29279 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.52■□□□□ 0.07
CTGFP29279 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTGFP29279 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CTGFP29279 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CTGFP29279 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.51■□□□□ 0.07
CTGFP29279 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
CTGFP29279 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC15.51■□□□□ 0.07
CTGFP29279 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.51■□□□□ 0.07
CTGFP29279 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTGFP29279 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.51■□□□□ 0.07
CTGFP29279 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CTGFP29279 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTGFP29279 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CTGFP29279 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTGFP29279 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.51■□□□□ 0.07
CTGFP29279 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTGFP29279 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.51■□□□□ 0.07
CTGFP29279 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTGFP29279 LINC02486-201ENST00000604157 3000 ntBASIC15.51■□□□□ 0.07
CTGFP29279 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTGFP29279 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
CTGFP29279 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTGFP29279 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTGFP29279 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTGFP29279 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC15.51■□□□□ 0.07
CTGFP29279 BX088651.3-201ENST00000418155 352 ntBASIC15.51■□□□□ 0.07
CTGFP29279 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.51■□□□□ 0.07
CTGFP29279 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC15.51■□□□□ 0.07
CTGFP29279 AC007279.1-201ENST00000448547 837 ntBASIC15.51■□□□□ 0.07
CTGFP29279 RNASEH2CP1-201ENST00000454281 502 ntBASIC15.51■□□□□ 0.07
CTGFP29279 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC15.51■□□□□ 0.07
CTGFP29279 AC113398.1-201ENST00000464124 406 ntBASIC15.51■□□□□ 0.07
CTGFP29279 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTGFP29279 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.51■□□□□ 0.07
CTGFP29279 AC103724.2-201ENST00000520355 476 ntBASIC15.51■□□□□ 0.07
CTGFP29279 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC15.51■□□□□ 0.07
CTGFP29279 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CTGFP29279 OR3A1-202ENST00000615105 966 ntBASIC15.51■□□□□ 0.07
CTGFP29279 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC15.51■□□□□ 0.07
CTGFP29279 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.51■□□□□ 0.07
CTGFP29279 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CTGFP29279 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CTGFP29279 AC015813.5-201ENST00000624641 1514 ntBASIC15.51■□□□□ 0.07
CTGFP29279 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTGFP29279 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTGFP29279 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTGFP29279 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTGFP29279 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.51■□□□□ 0.07
CTGFP29279 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTGFP29279 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CTGFP29279 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTGFP29279 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC15.51■□□□□ 0.07
CTGFP29279 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CTGFP29279 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTGFP29279 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC15.51■□□□□ 0.07
CTGFP29279 AC245140.2-201ENST00000624054 1939 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms