Protein–RNA interactions for Protein: P0C1H6

H2BFM, Histone H2B type F-M, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2BFMP0C1H6 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 FAM58BP-201ENST00000439056 645 ntBASIC12.59□□□□□ -0.39
H2BFMP0C1H6 AC234783.1-201ENST00000441761 496 ntBASIC12.59□□□□□ -0.39
H2BFMP0C1H6 AC012441.2-201ENST00000444843 739 ntBASIC12.59□□□□□ -0.39
H2BFMP0C1H6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 CROCCP4-201ENST00000457096 498 ntBASIC12.59□□□□□ -0.39
H2BFMP0C1H6 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 AC140658.4-201ENST00000561990 352 ntBASIC12.59□□□□□ -0.39
H2BFMP0C1H6 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H2BFMP0C1H6 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 AC079178.1-201ENST00000420915 656 ntBASIC12.58□□□□□ -0.4
H2BFMP0C1H6 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 AC026954.1-201ENST00000429771 1293 ntBASIC12.58□□□□□ -0.4
H2BFMP0C1H6 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 KRT18P15-201ENST00000458108 1291 ntBASIC12.58□□□□□ -0.4
H2BFMP0C1H6 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.58□□□□□ -0.4
H2BFMP0C1H6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 AC009955.4-201ENST00000597192 544 ntBASIC12.58□□□□□ -0.4
H2BFMP0C1H6 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 AC244157.2-201ENST00000616239 1006 ntBASIC12.58□□□□□ -0.4
H2BFMP0C1H6 AC090386.2-201ENST00000623010 1039 ntBASIC12.58□□□□□ -0.4
H2BFMP0C1H6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
H2BFMP0C1H6 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms