Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13CQ709C8 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13CQ709C8 AC097474.1-201ENST00000506481 1371 ntBASIC11.39□□□□□ -0.59
VPS13CQ709C8 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.39□□□□□ -0.59
VPS13CQ709C8 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
VPS13CQ709C8 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13CQ709C8 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13CQ709C8 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
VPS13CQ709C8 CA5BP1-205ENST00000435806 1064 ntBASIC11.39□□□□□ -0.59
VPS13CQ709C8 OR4C14P-201ENST00000440929 923 ntBASIC11.39□□□□□ -0.59
VPS13CQ709C8 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13CQ709C8 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC11.39□□□□□ -0.59
VPS13CQ709C8 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.39□□□□□ -0.59
VPS13CQ709C8 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 FTO-214ENST00000636218 2227 ntTSL 5 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 AC104115.1-201ENST00000484005 623 ntBASIC11.38□□□□□ -0.59
VPS13CQ709C8 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 AC093700.1-201ENST00000503348 717 ntBASIC11.38□□□□□ -0.59
VPS13CQ709C8 COQ10BP2-201ENST00000513804 724 ntBASIC11.38□□□□□ -0.59
VPS13CQ709C8 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC11.38□□□□□ -0.59
VPS13CQ709C8 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 AL157832.2-205ENST00000597245 1649 ntBASIC11.38□□□□□ -0.59
VPS13CQ709C8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13CQ709C8 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 AC113398.1-201ENST00000464124 406 ntBASIC11.38□□□□□ -0.59
VPS13CQ709C8 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 MIR5091-201ENST00000578707 93 ntBASIC11.38□□□□□ -0.59
VPS13CQ709C8 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC11.38□□□□□ -0.59
VPS13CQ709C8 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13CQ709C8 AC005912.2-201ENST00000619492 2400 ntBASIC11.37□□□□□ -0.59
VPS13CQ709C8 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13CQ709C8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13CQ709C8 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13CQ709C8 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13CQ709C8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13CQ709C8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13CQ709C8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13CQ709C8 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13CQ709C8 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13CQ709C8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13CQ709C8 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms