Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 RN7SL2-201ENST00000490232 300 ntBASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 OR4A49P-201ENST00000527050 632 ntBASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 MYL6-215ENST00000549566 685 ntTSL 2 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 RN7SL4P-201ENST00000584058 295 ntBASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 AC127002.1-201ENST00000619123 455 ntBASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 RN7SKP255-201ENST00000363442 313 ntBASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 RN7SKP203-201ENST00000363618 332 ntBASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 RN7SKP71-201ENST00000364558 318 ntBASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 7SK.1-201ENST00000365328 331 ntBASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 HDGF-202ENST00000368206 960 ntTSL 5 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 AC007279.1-201ENST00000448547 837 ntBASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 AC113398.1-201ENST00000464124 406 ntBASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 PPY-202ENST00000587006 431 ntTSL 3 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 AC090643.2-201ENST00000623442 2029 ntBASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 HNRNPABP1-201ENST00000406003 734 ntBASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 ABCC6P2-201ENST00000526069 590 ntBASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 AC061965.1-201ENST00000560524 1465 ntBASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 EGLN3-205ENST00000547327 2849 ntBASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 RPSAP70-201ENST00000504462 864 ntBASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 FTH1-205ENST00000529631 507 ntTSL 4 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 DLX4-206ENST00000611342 1662 ntBASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 AC005077.3-201ENST00000449614 213 ntBASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 AC005011.1-201ENST00000455206 210 ntBASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 CA6-205ENST00000480186 1493 ntTSL 2 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms