Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 AC008723.1-201ENST00000506922 207 ntBASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 PRKXP1-201ENST00000561423 1122 ntBASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 AC133540.1-201ENST00000620845 1019 ntBASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNYL3P0C7X3 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 ELOCP6-201ENST00000429066 328 ntBASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 ELOCP12-201ENST00000458706 328 ntBASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 AC022447.6-201ENST00000515522 438 ntBASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 MIR4722-201ENST00000578292 60 ntBASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 MIR4706-201ENST00000582134 82 ntBASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 AL355816.2-201ENST00000610049 647 ntBASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 HSPA7-201ENST00000445535 1927 ntBASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNYL3P0C7X3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.86□□□□□ -0.19
CCNYL3P0C7X3 DGCR9-201ENST00000609630 2415 ntBASIC13.86□□□□□ -0.19
CCNYL3P0C7X3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNYL3P0C7X3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CCNYL3P0C7X3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCNYL3P0C7X3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNYL3P0C7X3 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNYL3P0C7X3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNYL3P0C7X3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms