Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.74□□□□□ -0.37
ACTA1P68133 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.74□□□□□ -0.37
ACTA1P68133 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.74□□□□□ -0.37
ACTA1P68133 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
ACTA1P68133 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.74□□□□□ -0.37
ACTA1P68133 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.74□□□□□ -0.37
ACTA1P68133 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ACTA1P68133 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.74□□□□□ -0.37
ACTA1P68133 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.74□□□□□ -0.37
ACTA1P68133 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ACTA1P68133 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.74□□□□□ -0.37
ACTA1P68133 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.74□□□□□ -0.37
ACTA1P68133 AC010970.1-201ENST00000445125 1848 ntBASIC12.74□□□□□ -0.37
ACTA1P68133 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.74□□□□□ -0.37
ACTA1P68133 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ACTA1P68133 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.74□□□□□ -0.37
ACTA1P68133 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ACTA1P68133 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
ACTA1P68133 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ACTA1P68133 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
ACTA1P68133 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.73□□□□□ -0.37
ACTA1P68133 RCC2P1-201ENST00000452257 1476 ntBASIC12.73□□□□□ -0.37
ACTA1P68133 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.73□□□□□ -0.37
ACTA1P68133 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 AL358781.1-202ENST00000321081 1360 ntBASIC12.73□□□□□ -0.37
ACTA1P68133 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.73□□□□□ -0.37
ACTA1P68133 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ACTA1P68133 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.73□□□□□ -0.37
ACTA1P68133 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.73□□□□□ -0.37
ACTA1P68133 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.73□□□□□ -0.37
ACTA1P68133 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 PIN1P1-201ENST00000412108 996 ntBASIC12.73□□□□□ -0.37
ACTA1P68133 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.73□□□□□ -0.37
ACTA1P68133 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.73□□□□□ -0.37
ACTA1P68133 AL355864.2-201ENST00000447420 863 ntBASIC12.73□□□□□ -0.37
ACTA1P68133 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.73□□□□□ -0.37
ACTA1P68133 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ACTA1P68133 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
ACTA1P68133 TDH-203ENST00000531764 1110 ntBASIC12.73□□□□□ -0.37
ACTA1P68133 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
ACTA1P68133 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.73□□□□□ -0.37
ACTA1P68133 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
ACTA1P68133 AC025279.2-201ENST00000569730 653 ntBASIC12.73□□□□□ -0.37
ACTA1P68133 MIR5189-201ENST00000577370 114 ntBASIC12.73□□□□□ -0.37
ACTA1P68133 MIR4683-201ENST00000579659 81 ntBASIC12.73□□□□□ -0.37
ACTA1P68133 RPSAP52-203ENST00000622976 1023 ntBASIC12.73□□□□□ -0.37
ACTA1P68133 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.73□□□□□ -0.37
ACTA1P68133 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ACTA1P68133 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.73□□□□□ -0.37
ACTA1P68133 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.73□□□□□ -0.37
ACTA1P68133 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 MSNP1-201ENST00000511640 1732 ntBASIC12.73□□□□□ -0.37
ACTA1P68133 AL445250.1-201ENST00000641671 2259 ntBASIC12.73□□□□□ -0.37
ACTA1P68133 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
ACTA1P68133 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.73□□□□□ -0.37
ACTA1P68133 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.73□□□□□ -0.37
ACTA1P68133 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ACTA1P68133 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ACTA1P68133 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ACTA1P68133 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
ACTA1P68133 REXO1L6P-201ENST00000603433 1515 ntBASIC12.72□□□□□ -0.37
ACTA1P68133 AL445209.1-201ENST00000607269 3491 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms