Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 DUT-205ENST00000558813 769 ntTSL 2 BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 SNORA50.1-201ENST00000628590 135 ntBASIC10.63□□□□□ -0.71
HIST1H2BCP62807 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 PLK4-203ENST00000507249 3195 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 SORBS2-203ENST00000319471 2824 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 RAET1K-202ENST00000533735 1883 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 RAVER1-201ENST00000293677 3595 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 TUSC5-201ENST00000333813 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 ATP6V0A4-203ENST00000393054 3090 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
HIST1H2BCP62807 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 SERPINH1-202ENST00000524558 3391 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 FBLN1-203ENST00000340923 2348 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 AC091078.1-202ENST00000543286 2012 ntTSL 2 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 SIRPG-202ENST00000303415 1716 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 SIRPG-204ENST00000381580 1732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 STAT6-203ENST00000537215 2886 ntTSL 2 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 SDCCAG8-201ENST00000366541 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 PSMD5-201ENST00000210313 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 CYP1A1-209ENST00000612821 2402 ntTSL 5 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 KRT18P64-201ENST00000434946 1219 ntBASIC10.62□□□□□ -0.71
HIST1H2BCP62807 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 KRT18P43-201ENST00000469825 1281 ntBASIC10.62□□□□□ -0.71
HIST1H2BCP62807 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 MTDHP3-201ENST00000594186 672 ntBASIC10.62□□□□□ -0.71
HIST1H2BCP62807 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 AL031008.1-201ENST00000619963 541 ntBASIC10.62□□□□□ -0.71
HIST1H2BCP62807 AC004790.2-201ENST00000623588 572 ntBASIC10.62□□□□□ -0.71
HIST1H2BCP62807 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 POLL-201ENST00000299206 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 TRIM46-201ENST00000334634 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 INTS9-201ENST00000416984 2759 ntTSL 2 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 AL121723.1-201ENST00000445194 1519 ntBASIC10.62□□□□□ -0.71
HIST1H2BCP62807 KLF11-206ENST00000540845 3885 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 NTRK3-204ENST00000360948 3004 ntTSL 5 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 CICP7-201ENST00000432723 2477 ntBASIC10.62□□□□□ -0.71
HIST1H2BCP62807 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 CDRT4-204ENST00000619038 2498 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 OAS1-208ENST00000551241 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 ZNF300-203ENST00000418587 3226 ntTSL 2 BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 ELMO1-201ENST00000310758 4022 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HIST1H2BCP62807 CAPN10-AS1-201ENST00000567819 4000 ntBASIC10.62□□□□□ -0.71
HIST1H2BCP62807 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC10.61□□□□□ -0.71
HIST1H2BCP62807 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BCP62807 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BCP62807 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BCP62807 NMT2-202ENST00000378165 2907 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BCP62807 CEP89-207ENST00000591863 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BCP62807 SPRY2-202ENST00000377104 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms