Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 HMGA1P1-201ENST00000415560 1062 ntBASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 RPL18AP8-201ENST00000486071 528 ntBASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 CHCHD2P2-201ENST00000503744 321 ntBASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 TMCO5B-205ENST00000530020 894 ntBASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 RN7SL470P-201ENST00000583069 259 ntBASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 AC139749.1-202ENST00000617529 3139 ntBASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6V0A1Q93050 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 TCAM1P-207ENST00000485295 1537 ntBASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 AC092053.3-201ENST00000641308 4975 ntBASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 AC152010.1-201ENST00000415779 2006 ntBASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 AL354861.1-201ENST00000445213 355 ntBASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 GOLGA2P8-201ENST00000505201 779 ntBASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 HERC2P11-201ENST00000562845 725 ntBASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 AC100756.2-201ENST00000569537 736 ntBASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.89■□□□□ 0.13
ATP6V0A1Q93050 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
ATP6V0A1Q93050 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.88■□□□□ 0.13
ATP6V0A1Q93050 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP6V0A1Q93050 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.88■□□□□ 0.13
ATP6V0A1Q93050 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP6V0A1Q93050 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
ATP6V0A1Q93050 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP6V0A1Q93050 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
ATP6V0A1Q93050 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ATP6V0A1Q93050 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
ATP6V0A1Q93050 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP6V0A1Q93050 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ATP6V0A1Q93050 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ATP6V0A1Q93050 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.88■□□□□ 0.13
ATP6V0A1Q93050 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms