Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CDKL1Q00532 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDKL1Q00532 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDKL1Q00532 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CDKL1Q00532 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.07□□□□□ -0.16
CDKL1Q00532 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDKL1Q00532 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
CDKL1Q00532 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
CDKL1Q00532 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDKL1Q00532 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.07□□□□□ -0.16
CDKL1Q00532 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.07□□□□□ -0.16
CDKL1Q00532 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDKL1Q00532 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDKL1Q00532 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDKL1Q00532 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDKL1Q00532 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDKL1Q00532 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.07□□□□□ -0.16
CDKL1Q00532 KRT18P15-201ENST00000458108 1291 ntBASIC14.07□□□□□ -0.16
CDKL1Q00532 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.07□□□□□ -0.16
CDKL1Q00532 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.07□□□□□ -0.16
CDKL1Q00532 AC005324.6-201ENST00000587972 613 ntBASIC14.07□□□□□ -0.16
CDKL1Q00532 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.07□□□□□ -0.16
CDKL1Q00532 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.07□□□□□ -0.16
CDKL1Q00532 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.07□□□□□ -0.16
CDKL1Q00532 AL591471.1-201ENST00000621855 229 ntBASIC14.07□□□□□ -0.16
CDKL1Q00532 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
CDKL1Q00532 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDKL1Q00532 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDKL1Q00532 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDKL1Q00532 AHCYP4-201ENST00000419201 1315 ntBASIC14.07□□□□□ -0.16
CDKL1Q00532 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDKL1Q00532 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDKL1Q00532 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CDKL1Q00532 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
CDKL1Q00532 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDKL1Q00532 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
CDKL1Q00532 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDKL1Q00532 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDKL1Q00532 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDKL1Q00532 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.07□□□□□ -0.16
CDKL1Q00532 AC087386.2-201ENST00000623212 4637 ntBASIC14.07□□□□□ -0.16
CDKL1Q00532 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDKL1Q00532 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CDKL1Q00532 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDKL1Q00532 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.06□□□□□ -0.16
CDKL1Q00532 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDKL1Q00532 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.06□□□□□ -0.16
CDKL1Q00532 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDKL1Q00532 CYP4F23P-201ENST00000593402 1579 ntBASIC14.06□□□□□ -0.16
CDKL1Q00532 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDKL1Q00532 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDKL1Q00532 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDKL1Q00532 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDKL1Q00532 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.06□□□□□ -0.16
CDKL1Q00532 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.06□□□□□ -0.16
CDKL1Q00532 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDKL1Q00532 MTX1P1-201ENST00000440904 838 ntBASIC14.06□□□□□ -0.16
CDKL1Q00532 Z93015.1-201ENST00000451718 390 ntBASIC14.06□□□□□ -0.16
CDKL1Q00532 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.06□□□□□ -0.16
CDKL1Q00532 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CDKL1Q00532 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDKL1Q00532 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
CDKL1Q00532 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDKL1Q00532 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.06□□□□□ -0.16
CDKL1Q00532 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.06□□□□□ -0.16
CDKL1Q00532 AC005962.1-201ENST00000584100 773 ntBASIC14.06□□□□□ -0.16
CDKL1Q00532 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.06□□□□□ -0.16
CDKL1Q00532 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.06□□□□□ -0.16
CDKL1Q00532 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.06□□□□□ -0.16
CDKL1Q00532 AC010328.2-201ENST00000597698 1111 ntBASIC14.06□□□□□ -0.16
CDKL1Q00532 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDKL1Q00532 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.06□□□□□ -0.16
CDKL1Q00532 AL023803.2-201ENST00000620080 638 ntBASIC14.06□□□□□ -0.16
CDKL1Q00532 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDKL1Q00532 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDKL1Q00532 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CDKL1Q00532 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDKL1Q00532 MIR497HG-202ENST00000572453 3838 ntBASIC14.06□□□□□ -0.16
CDKL1Q00532 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDKL1Q00532 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDKL1Q00532 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDKL1Q00532 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKL1Q00532 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
CDKL1Q00532 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CDKL1Q00532 AGAP10P-201ENST00000454844 2418 ntBASIC14.05□□□□□ -0.16
CDKL1Q00532 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKL1Q00532 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
CDKL1Q00532 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.05□□□□□ -0.16
CDKL1Q00532 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKL1Q00532 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKL1Q00532 KRT18P36-201ENST00000411618 1276 ntBASIC14.05□□□□□ -0.16
CDKL1Q00532 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.05□□□□□ -0.16
CDKL1Q00532 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.05□□□□□ -0.16
CDKL1Q00532 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.05□□□□□ -0.16
CDKL1Q00532 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.05□□□□□ -0.16
CDKL1Q00532 RPSAP36-202ENST00000494591 1261 ntBASIC14.05□□□□□ -0.16
CDKL1Q00532 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CDKL1Q00532 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.05□□□□□ -0.16
CDKL1Q00532 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDKL1Q00532 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms