Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.46□□□□□ -0.57
UPK2O00526 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC11.46□□□□□ -0.57
UPK2O00526 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC11.46□□□□□ -0.57
UPK2O00526 AC107918.4-201ENST00000641966 3141 ntBASIC11.46□□□□□ -0.57
UPK2O00526 TUBB4AP1-201ENST00000450755 1325 ntBASIC11.46□□□□□ -0.57
UPK2O00526 USP39-220ENST00000613444 2161 ntTSL 2 BASIC11.46□□□□□ -0.57
UPK2O00526 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
UPK2O00526 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC11.46□□□□□ -0.57
UPK2O00526 BOLA2P3-201ENST00000404566 256 ntBASIC11.46□□□□□ -0.57
UPK2O00526 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
UPK2O00526 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC11.46□□□□□ -0.57
UPK2O00526 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC11.46□□□□□ -0.57
UPK2O00526 HIST1H2BPS3-201ENST00000419683 341 ntBASIC11.46□□□□□ -0.57
UPK2O00526 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 KLF2P4-201ENST00000451959 1225 ntBASIC11.46□□□□□ -0.57
UPK2O00526 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC11.46□□□□□ -0.57
UPK2O00526 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC11.46□□□□□ -0.57
UPK2O00526 AC003686.1-201ENST00000550956 1034 ntBASIC11.46□□□□□ -0.57
UPK2O00526 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 ORC6-206ENST00000568364 888 ntTSL 5 BASIC11.46□□□□□ -0.57
UPK2O00526 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 AC005962.1-201ENST00000584100 773 ntBASIC11.46□□□□□ -0.57
UPK2O00526 APOC4-201ENST00000591600 348 ntTSL 3 BASIC11.46□□□□□ -0.57
UPK2O00526 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC11.46□□□□□ -0.57
UPK2O00526 AC133540.1-201ENST00000620845 1019 ntBASIC11.46□□□□□ -0.57
UPK2O00526 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 RPL35-206ENST00000629845 340 ntTSL 5 BASIC11.46□□□□□ -0.57
UPK2O00526 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
UPK2O00526 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC11.46□□□□□ -0.57
UPK2O00526 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UPK2O00526 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
UPK2O00526 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC11.46□□□□□ -0.58
UPK2O00526 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC11.46□□□□□ -0.58
UPK2O00526 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
UPK2O00526 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
UPK2O00526 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
UPK2O00526 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.46□□□□□ -0.58
UPK2O00526 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UPK2O00526 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
UPK2O00526 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.46□□□□□ -0.58
UPK2O00526 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
UPK2O00526 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UPK2O00526 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
UPK2O00526 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
UPK2O00526 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
UPK2O00526 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
UPK2O00526 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.45□□□□□ -0.58
UPK2O00526 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
UPK2O00526 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC11.45□□□□□ -0.58
UPK2O00526 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC11.45□□□□□ -0.58
UPK2O00526 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
UPK2O00526 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 TP73-207ENST00000378290 1831 ntTSL 2 BASIC11.45□□□□□ -0.58
UPK2O00526 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
UPK2O00526 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC11.45□□□□□ -0.58
UPK2O00526 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 TISP43-201ENST00000409793 538 ntTSL 4 BASIC11.45□□□□□ -0.58
UPK2O00526 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC11.45□□□□□ -0.58
UPK2O00526 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
UPK2O00526 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
UPK2O00526 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC11.45□□□□□ -0.58
UPK2O00526 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC11.45□□□□□ -0.58
UPK2O00526 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC11.45□□□□□ -0.58
UPK2O00526 AC006122.1-201ENST00000493323 440 ntBASIC11.45□□□□□ -0.58
UPK2O00526 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC11.45□□□□□ -0.58
UPK2O00526 PGAM1P5-201ENST00000548011 764 ntBASIC11.45□□□□□ -0.58
UPK2O00526 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.45□□□□□ -0.58
UPK2O00526 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC11.45□□□□□ -0.58
UPK2O00526 CECR7-204ENST00000609932 568 ntTSL 2 BASIC11.45□□□□□ -0.58
UPK2O00526 AL162426.1-201ENST00000624141 743 ntBASIC11.45□□□□□ -0.58
UPK2O00526 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.45□□□□□ -0.58
UPK2O00526 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC11.45□□□□□ -0.58
UPK2O00526 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC11.45□□□□□ -0.58
UPK2O00526 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
UPK2O00526 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC11.45□□□□□ -0.58
UPK2O00526 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
UPK2O00526 ABCD1P2-201ENST00000429313 1601 ntBASIC11.45□□□□□ -0.58
UPK2O00526 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
UPK2O00526 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms