Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 RN7SL713P-201ENST00000582127 302 ntBASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 AC060814.4-201ENST00000594169 2163 ntBASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.55■□□□□ 0.24
CHAMP1Q96JM3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 AL021155.1-201ENST00000438808 2637 ntBASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 CHMP1AP1-201ENST00000445563 662 ntBASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 SLC25A47P1-201ENST00000531577 414 ntBASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 CR383656.2-201ENST00000548656 2254 ntBASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHAMP1Q96JM3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 AC008735.3-201ENST00000596646 500 ntBASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 AL136301.1-201ENST00000615830 422 ntBASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 AC138951.2-201ENST00000623455 1161 ntBASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 AC026271.4-201ENST00000578214 1833 ntBASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms