Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 GGCT-203ENST00000409144 836 ntTSL 2 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 MAGEA5-201ENST00000446757 942 ntBASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 EEF1DP6-201ENST00000449232 372 ntBASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 AC073150.1-201ENST00000450406 1084 ntBASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 AC116345.2-201ENST00000512837 523 ntBASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 RTN3P1-201ENST00000536295 711 ntBASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 AC012044.1-201ENST00000603431 297 ntBASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 AL157813.1-201ENST00000612996 587 ntBASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 RETN-203ENST00000629642 400 ntTSL 5 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CLDND2Q8NHS1 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CLDND2Q8NHS1 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CLDND2Q8NHS1 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CLDND2Q8NHS1 CYP4F23P-201ENST00000593402 1579 ntBASIC12.21□□□□□ -0.46
CLDND2Q8NHS1 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CLDND2Q8NHS1 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.21□□□□□ -0.46
CLDND2Q8NHS1 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
CLDND2Q8NHS1 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CLDND2Q8NHS1 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.21□□□□□ -0.46
CLDND2Q8NHS1 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.21□□□□□ -0.46
CLDND2Q8NHS1 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.21□□□□□ -0.46
CLDND2Q8NHS1 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CLDND2Q8NHS1 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 AC015909.5-201ENST00000624336 2266 ntBASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 AC239868.1-201ENST00000369385 493 ntBASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 AL353726.2-201ENST00000623259 884 ntBASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms