Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC005730.2-201ENST00000564549 1184 ntBASIC12.8□□□□□ -0.36
CLRN1P58418 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.8□□□□□ -0.36
CLRN1P58418 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.8□□□□□ -0.36
CLRN1P58418 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLRN1P58418 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.8□□□□□ -0.36
CLRN1P58418 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.8□□□□□ -0.36
CLRN1P58418 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.8□□□□□ -0.36
CLRN1P58418 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.8□□□□□ -0.36
CLRN1P58418 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLRN1P58418 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.8□□□□□ -0.36
CLRN1P58418 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLRN1P58418 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLRN1P58418 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLRN1P58418 AHCYP4-201ENST00000419201 1315 ntBASIC12.8□□□□□ -0.36
CLRN1P58418 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.8□□□□□ -0.36
CLRN1P58418 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLRN1P58418 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CLRN1P58418 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLRN1P58418 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
CLRN1P58418 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLRN1P58418 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLRN1P58418 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CLRN1P58418 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLRN1P58418 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CLRN1P58418 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLRN1P58418 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CLRN1P58418 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CLRN1P58418 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.8□□□□□ -0.36
CLRN1P58418 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.79□□□□□ -0.36
CLRN1P58418 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.79□□□□□ -0.36
CLRN1P58418 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.79□□□□□ -0.36
CLRN1P58418 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CLRN1P58418 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.79□□□□□ -0.36
CLRN1P58418 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.79□□□□□ -0.36
CLRN1P58418 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.79□□□□□ -0.36
CLRN1P58418 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 AC111170.3-201ENST00000624282 2464 ntBASIC12.79□□□□□ -0.36
CLRN1P58418 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CLRN1P58418 CYP4F23P-201ENST00000593402 1579 ntBASIC12.79□□□□□ -0.36
CLRN1P58418 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CLRN1P58418 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.79□□□□□ -0.36
CLRN1P58418 GK-202ENST00000378941 458 ntTSL 3 BASIC12.79□□□□□ -0.36
CLRN1P58418 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CLRN1P58418 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.79□□□□□ -0.36
CLRN1P58418 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 FAM86HP-204ENST00000513466 959 ntBASIC12.79□□□□□ -0.36
CLRN1P58418 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.79□□□□□ -0.36
CLRN1P58418 AC022217.1-201ENST00000521069 738 ntBASIC12.79□□□□□ -0.36
CLRN1P58418 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.79□□□□□ -0.36
CLRN1P58418 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.79□□□□□ -0.36
CLRN1P58418 PGAM1P5-201ENST00000548011 764 ntBASIC12.79□□□□□ -0.36
CLRN1P58418 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.79□□□□□ -0.36
CLRN1P58418 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.79□□□□□ -0.36
CLRN1P58418 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.79□□□□□ -0.36
CLRN1P58418 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.79□□□□□ -0.36
CLRN1P58418 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
CLRN1P58418 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.79□□□□□ -0.36
CLRN1P58418 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CLRN1P58418 AL096828.3-201ENST00000615354 462 ntBASIC12.79□□□□□ -0.36
CLRN1P58418 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 AC090386.2-201ENST00000623010 1039 ntBASIC12.79□□□□□ -0.36
CLRN1P58418 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.79□□□□□ -0.36
CLRN1P58418 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CLRN1P58418 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.79□□□□□ -0.36
CLRN1P58418 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CLRN1P58418 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.79□□□□□ -0.36
CLRN1P58418 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLRN1P58418 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms