Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP13P45452 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP13P45452 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP13P45452 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP13P45452 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MMP13P45452 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
MMP13P45452 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
MMP13P45452 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MMP13P45452 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP13P45452 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP13P45452 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
MMP13P45452 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP13P45452 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP13P45452 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP13P45452 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP13P45452 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.88□□□□□ -0.03
MMP13P45452 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.88□□□□□ -0.03
MMP13P45452 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
MMP13P45452 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.87□□□□□ -0.03
MMP13P45452 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 TMBIM7P-202ENST00000641474 1516 ntBASIC14.87□□□□□ -0.03
MMP13P45452 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
MMP13P45452 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.87□□□□□ -0.03
MMP13P45452 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.87□□□□□ -0.03
MMP13P45452 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
MMP13P45452 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
MMP13P45452 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
MMP13P45452 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.87□□□□□ -0.03
MMP13P45452 AC118758.2-201ENST00000614242 2813 ntBASIC14.87□□□□□ -0.03
MMP13P45452 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.87□□□□□ -0.03
MMP13P45452 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
MMP13P45452 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
MMP13P45452 MIR663B-201ENST00000408361 115 ntBASIC14.87□□□□□ -0.03
MMP13P45452 AC012441.2-201ENST00000444843 739 ntBASIC14.87□□□□□ -0.03
MMP13P45452 KLF2P1-201ENST00000447438 1042 ntBASIC14.87□□□□□ -0.03
MMP13P45452 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.87□□□□□ -0.03
MMP13P45452 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.87□□□□□ -0.03
MMP13P45452 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.87□□□□□ -0.03
MMP13P45452 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.87□□□□□ -0.03
MMP13P45452 AC005730.2-201ENST00000564549 1184 ntBASIC14.87□□□□□ -0.03
MMP13P45452 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.87□□□□□ -0.03
MMP13P45452 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.87□□□□□ -0.03
MMP13P45452 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.87□□□□□ -0.03
MMP13P45452 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.87□□□□□ -0.03
MMP13P45452 AC009884.2-201ENST00000603110 324 ntBASIC14.87□□□□□ -0.03
MMP13P45452 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.87□□□□□ -0.03
MMP13P45452 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.87□□□□□ -0.03
MMP13P45452 AL033527.4-201ENST00000641026 673 ntBASIC14.87□□□□□ -0.03
MMP13P45452 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
MMP13P45452 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
MMP13P45452 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
MMP13P45452 AL008718.2-201ENST00000609206 1313 ntBASIC14.87□□□□□ -0.03
MMP13P45452 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP13P45452 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP13P45452 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
MMP13P45452 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
MMP13P45452 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.86□□□□□ -0.03
MMP13P45452 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.86□□□□□ -0.03
MMP13P45452 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP13P45452 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
MMP13P45452 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
MMP13P45452 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.86□□□□□ -0.03
MMP13P45452 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP13P45452 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP13P45452 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP13P45452 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.86□□□□□ -0.03
MMP13P45452 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.86□□□□□ -0.03
MMP13P45452 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.86□□□□□ -0.03
MMP13P45452 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
MMP13P45452 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.86□□□□□ -0.03
MMP13P45452 AC021723.1-201ENST00000486306 515 ntBASIC14.86□□□□□ -0.03
MMP13P45452 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms