Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC1A1P43005 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC1A1P43005 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
SLC1A1P43005 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC1A1P43005 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A1P43005 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A1P43005 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A1P43005 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A1P43005 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SLC1A1P43005 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A1P43005 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A1P43005 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A1P43005 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A1P43005 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC1A1P43005 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SLC1A1P43005 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC1A1P43005 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A1P43005 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A1P43005 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A1P43005 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC1A1P43005 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A1P43005 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A1P43005 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC1A1P43005 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A1P43005 POM121L10P-201ENST00000436994 1285 ntBASIC14.93□□□□□ -0.02
SLC1A1P43005 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC1A1P43005 GOLGA2P8-201ENST00000505201 779 ntBASIC14.93□□□□□ -0.02
SLC1A1P43005 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.93□□□□□ -0.02
SLC1A1P43005 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC1A1P43005 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.93□□□□□ -0.02
SLC1A1P43005 RAB43P1-201ENST00000561790 589 ntBASIC14.93□□□□□ -0.02
SLC1A1P43005 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.93□□□□□ -0.02
SLC1A1P43005 AC005324.6-201ENST00000587972 613 ntBASIC14.93□□□□□ -0.02
SLC1A1P43005 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SLC1A1P43005 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC1A1P43005 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC1A1P43005 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC1A1P43005 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SLC1A1P43005 AGAP12P-201ENST00000585227 2359 ntBASIC14.93□□□□□ -0.02
SLC1A1P43005 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC1A1P43005 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A1P43005 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A1P43005 AP002353.1-201ENST00000528257 1599 ntBASIC14.93□□□□□ -0.02
SLC1A1P43005 SALL4P6-201ENST00000429385 1691 ntBASIC14.93□□□□□ -0.02
SLC1A1P43005 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC1A1P43005 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC1A1P43005 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SLC1A1P43005 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC1A1P43005 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC1A1P43005 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC1A1P43005 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
SLC1A1P43005 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC1A1P43005 AC114271.1-201ENST00000612689 2813 ntBASIC14.92□□□□□ -0.02
SLC1A1P43005 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC1A1P43005 YBX1P6-201ENST00000442962 1002 ntBASIC14.92□□□□□ -0.02
SLC1A1P43005 COX20P2-201ENST00000452636 358 ntBASIC14.92□□□□□ -0.02
SLC1A1P43005 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC1A1P43005 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.92□□□□□ -0.02
SLC1A1P43005 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 MIR4741-201ENST00000579822 90 ntBASIC14.92□□□□□ -0.02
SLC1A1P43005 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SLC1A1P43005 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC1A1P43005 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC1A1P43005 AC012645.4-201ENST00000610691 1061 ntBASIC14.92□□□□□ -0.02
SLC1A1P43005 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC1A1P43005 AC025183.3-201ENST00000623526 1482 ntBASIC14.92□□□□□ -0.02
SLC1A1P43005 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC1A1P43005 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC1A1P43005 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms