Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLCN1P35523 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CLCN1P35523 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 KRT8P35-201ENST00000483942 1338 ntBASIC16.3■□□□□ 0.2
CLCN1P35523 AL132642.2-201ENST00000623423 1998 ntBASIC16.3■□□□□ 0.2
CLCN1P35523 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLCN1P35523 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.3■□□□□ 0.2
CLCN1P35523 AL645937.2-201ENST00000396808 931 ntBASIC16.3■□□□□ 0.2
CLCN1P35523 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.3■□□□□ 0.2
CLCN1P35523 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.3■□□□□ 0.2
CLCN1P35523 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.3■□□□□ 0.2
CLCN1P35523 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.3■□□□□ 0.2
CLCN1P35523 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.3■□□□□ 0.2
CLCN1P35523 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.3■□□□□ 0.2
CLCN1P35523 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.3■□□□□ 0.2
CLCN1P35523 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 API5-211ENST00000534695 560 ntTSL 5 BASIC16.3■□□□□ 0.2
CLCN1P35523 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.3■□□□□ 0.2
CLCN1P35523 LINC01922-201ENST00000562582 719 ntBASIC16.3■□□□□ 0.2
CLCN1P35523 AL359711.2-201ENST00000563105 872 ntBASIC16.3■□□□□ 0.2
CLCN1P35523 AC124283.3-201ENST00000570869 594 ntBASIC16.3■□□□□ 0.2
CLCN1P35523 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.3■□□□□ 0.2
CLCN1P35523 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 AP003400.6-201ENST00000624698 740 ntBASIC16.3■□□□□ 0.2
CLCN1P35523 PRSS30P-206ENST00000641773 873 ntBASIC16.3■□□□□ 0.2
CLCN1P35523 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 TNRC18P1-201ENST00000502875 3650 ntBASIC16.3■□□□□ 0.2
CLCN1P35523 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 AC005014.1-201ENST00000432006 2976 ntBASIC16.3■□□□□ 0.2
CLCN1P35523 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.3■□□□□ 0.2
CLCN1P35523 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.3■□□□□ 0.2
CLCN1P35523 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLCN1P35523 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLCN1P35523 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN1P35523 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC16.3■□□□□ 0.2
CLCN1P35523 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLCN1P35523 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CLCN1P35523 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC16.29■□□□□ 0.2
CLCN1P35523 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLCN1P35523 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 AL391825.1-201ENST00000457671 1364 ntBASIC16.29■□□□□ 0.2
CLCN1P35523 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.29■□□□□ 0.2
CLCN1P35523 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC16.29■□□□□ 0.2
CLCN1P35523 AL731571.1-201ENST00000617058 5428 ntBASIC16.29■□□□□ 0.2
CLCN1P35523 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLCN1P35523 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.29■□□□□ 0.2
CLCN1P35523 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 AC236430.1-201ENST00000402231 743 ntBASIC16.29■□□□□ 0.2
CLCN1P35523 AL442647.2-201ENST00000429864 857 ntBASIC16.29■□□□□ 0.2
CLCN1P35523 AC002472.2-201ENST00000442739 958 ntBASIC16.29■□□□□ 0.2
CLCN1P35523 AC104596.2-201ENST00000512793 793 ntBASIC16.29■□□□□ 0.2
CLCN1P35523 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.29■□□□□ 0.2
CLCN1P35523 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CLCN1P35523 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.29■□□□□ 0.2
CLCN1P35523 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CLCN1P35523 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.29■□□□□ 0.2
CLCN1P35523 SPDYE22P-201ENST00000582158 798 ntBASIC16.29■□□□□ 0.2
CLCN1P35523 TMEM261P1-201ENST00000604899 340 ntBASIC16.29■□□□□ 0.2
CLCN1P35523 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.29■□□□□ 0.2
CLCN1P35523 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLCN1P35523 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC16.29■□□□□ 0.2
CLCN1P35523 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC16.29■□□□□ 0.2
CLCN1P35523 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 AL031595.1-201ENST00000623969 4709 ntBASIC16.29■□□□□ 0.2
CLCN1P35523 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN1P35523 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.29■□□□□ 0.2
CLCN1P35523 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC16.29■□□□□ 0.2
CLCN1P35523 AL137783.1-201ENST00000623494 1896 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms