Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FAM228BP0C875 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.22■□□□□ 0.03
FAM228BP0C875 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FAM228BP0C875 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
FAM228BP0C875 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC15.22■□□□□ 0.03
FAM228BP0C875 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FAM228BP0C875 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
FAM228BP0C875 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
FAM228BP0C875 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.21■□□□□ 0.03
FAM228BP0C875 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 LINC00115-201ENST00000473798 1317 ntBASIC15.21■□□□□ 0.03
FAM228BP0C875 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
FAM228BP0C875 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
FAM228BP0C875 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
FAM228BP0C875 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.21■□□□□ 0.03
FAM228BP0C875 AC092580.1-201ENST00000433998 658 ntBASIC15.21■□□□□ 0.03
FAM228BP0C875 CTBP2P5-201ENST00000454986 1264 ntBASIC15.21■□□□□ 0.03
FAM228BP0C875 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.21■□□□□ 0.03
FAM228BP0C875 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.21■□□□□ 0.03
FAM228BP0C875 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.21■□□□□ 0.03
FAM228BP0C875 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.21■□□□□ 0.03
FAM228BP0C875 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.21■□□□□ 0.03
FAM228BP0C875 AC133540.1-201ENST00000620845 1019 ntBASIC15.21■□□□□ 0.03
FAM228BP0C875 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM228BP0C875 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
FAM228BP0C875 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC15.21■□□□□ 0.02
FAM228BP0C875 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.02
FAM228BP0C875 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
FAM228BP0C875 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
FAM228BP0C875 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.2■□□□□ 0.02
FAM228BP0C875 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM228BP0C875 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
FAM228BP0C875 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FAM228BP0C875 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM228BP0C875 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM228BP0C875 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM228BP0C875 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
FAM228BP0C875 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FAM228BP0C875 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
FAM228BP0C875 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
FAM228BP0C875 AL355102.3-201ENST00000554299 1678 ntBASIC15.2■□□□□ 0.02
FAM228BP0C875 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM228BP0C875 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
FAM228BP0C875 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
FAM228BP0C875 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM228BP0C875 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
FAM228BP0C875 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
FAM228BP0C875 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.2■□□□□ 0.02
FAM228BP0C875 AC079178.1-201ENST00000420915 656 ntBASIC15.2■□□□□ 0.02
FAM228BP0C875 AL354877.1-201ENST00000424412 413 ntBASIC15.2■□□□□ 0.02
FAM228BP0C875 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
FAM228BP0C875 FAM58BP-201ENST00000439056 645 ntBASIC15.2■□□□□ 0.02
FAM228BP0C875 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.2■□□□□ 0.02
FAM228BP0C875 KLF2P4-201ENST00000451959 1225 ntBASIC15.2■□□□□ 0.02
FAM228BP0C875 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.2■□□□□ 0.02
FAM228BP0C875 AC079316.1-201ENST00000548397 411 ntBASIC15.2■□□□□ 0.02
FAM228BP0C875 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FAM228BP0C875 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.2■□□□□ 0.02
FAM228BP0C875 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.2■□□□□ 0.02
FAM228BP0C875 JPT2-214ENST00000569765 782 ntTSL 2 BASIC15.2■□□□□ 0.02
FAM228BP0C875 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FAM228BP0C875 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.2■□□□□ 0.02
FAM228BP0C875 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.2■□□□□ 0.02
FAM228BP0C875 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
FAM228BP0C875 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.2■□□□□ 0.02
FAM228BP0C875 AC244157.2-201ENST00000616239 1006 ntBASIC15.2■□□□□ 0.02
FAM228BP0C875 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.2■□□□□ 0.02
FAM228BP0C875 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.2■□□□□ 0.02
FAM228BP0C875 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.2■□□□□ 0.02
FAM228BP0C875 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC15.2■□□□□ 0.02
FAM228BP0C875 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM228BP0C875 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.2■□□□□ 0.02
FAM228BP0C875 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FAM228BP0C875 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC15.2■□□□□ 0.02
FAM228BP0C875 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
FAM228BP0C875 STX3-207ENST00000633708 3111 ntTSL 5 BASIC15.2■□□□□ 0.02
FAM228BP0C875 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
FAM228BP0C875 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM228BP0C875 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
FAM228BP0C875 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
FAM228BP0C875 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.2■□□□□ 0.02
FAM228BP0C875 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC15.19■□□□□ 0.02
FAM228BP0C875 AL590824.1-201ENST00000403828 1349 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms