Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AP000437.1-201ENST00000624057 2085 ntBASIC13.28□□□□□ -0.28
HPS1Q92902 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC13.28□□□□□ -0.28
HPS1Q92902 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HPS1Q92902 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
HPS1Q92902 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.28□□□□□ -0.28
HPS1Q92902 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.28□□□□□ -0.28
HPS1Q92902 INE2-201ENST00000630399 1874 ntBASIC13.28□□□□□ -0.28
HPS1Q92902 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.28□□□□□ -0.28
HPS1Q92902 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.28□□□□□ -0.28
HPS1Q92902 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
HPS1Q92902 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
HPS1Q92902 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HPS1Q92902 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.28□□□□□ -0.28
HPS1Q92902 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HPS1Q92902 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.28□□□□□ -0.28
HPS1Q92902 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.28□□□□□ -0.28
HPS1Q92902 AC007274.1-201ENST00000439805 662 ntBASIC13.28□□□□□ -0.28
HPS1Q92902 RPL13P2-201ENST00000440687 659 ntBASIC13.28□□□□□ -0.28
HPS1Q92902 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.28□□□□□ -0.28
HPS1Q92902 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.28□□□□□ -0.28
HPS1Q92902 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.28□□□□□ -0.28
HPS1Q92902 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.28□□□□□ -0.28
HPS1Q92902 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 MIR4313-201ENST00000580760 101 ntBASIC13.28□□□□□ -0.28
HPS1Q92902 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.28□□□□□ -0.28
HPS1Q92902 CLIC4P2-201ENST00000601934 717 ntBASIC13.28□□□□□ -0.28
HPS1Q92902 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.28□□□□□ -0.28
HPS1Q92902 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.28□□□□□ -0.28
HPS1Q92902 AC087821.1-201ENST00000623639 567 ntBASIC13.28□□□□□ -0.28
HPS1Q92902 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.28□□□□□ -0.28
HPS1Q92902 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.28□□□□□ -0.28
HPS1Q92902 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.28□□□□□ -0.28
HPS1Q92902 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
HPS1Q92902 PAM-203ENST00000346918 3302 ntTSL 5 BASIC13.28□□□□□ -0.28
HPS1Q92902 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HPS1Q92902 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HPS1Q92902 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.28□□□□□ -0.28
HPS1Q92902 SUPT20HL1-201ENST00000436466 2618 ntBASIC13.27□□□□□ -0.28
HPS1Q92902 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HPS1Q92902 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
HPS1Q92902 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
HPS1Q92902 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
HPS1Q92902 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
HPS1Q92902 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HPS1Q92902 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
HPS1Q92902 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HPS1Q92902 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
HPS1Q92902 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HPS1Q92902 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HPS1Q92902 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
HPS1Q92902 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HPS1Q92902 REC114-201ENST00000331090 927 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HPS1Q92902 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HPS1Q92902 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.27□□□□□ -0.29
HPS1Q92902 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.27□□□□□ -0.29
HPS1Q92902 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HPS1Q92902 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.27□□□□□ -0.29
HPS1Q92902 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.27□□□□□ -0.29
HPS1Q92902 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC13.27□□□□□ -0.29
HPS1Q92902 ACA64.2-201ENST00000459014 129 ntBASIC13.27□□□□□ -0.29
HPS1Q92902 RN7SL837P-201ENST00000463010 287 ntBASIC13.27□□□□□ -0.29
HPS1Q92902 KRT18P43-201ENST00000469825 1281 ntBASIC13.27□□□□□ -0.29
HPS1Q92902 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.27□□□□□ -0.29
HPS1Q92902 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.27□□□□□ -0.29
HPS1Q92902 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.27□□□□□ -0.29
HPS1Q92902 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HPS1Q92902 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.27□□□□□ -0.29
HPS1Q92902 KRT17P8-201ENST00000540749 863 ntBASIC13.27□□□□□ -0.29
HPS1Q92902 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HPS1Q92902 HILS1-202ENST00000545329 423 ntBASIC13.27□□□□□ -0.29
HPS1Q92902 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.27□□□□□ -0.29
HPS1Q92902 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.27□□□□□ -0.29
HPS1Q92902 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.27□□□□□ -0.29
HPS1Q92902 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.27□□□□□ -0.29
HPS1Q92902 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
HPS1Q92902 AC015936.2-201ENST00000593177 259 ntBASIC13.27□□□□□ -0.29
HPS1Q92902 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.27□□□□□ -0.29
HPS1Q92902 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HPS1Q92902 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.27□□□□□ -0.29
HPS1Q92902 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms