Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 MIR193BHG-211ENST00000641433 5365 ntBASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 RN7SKP230-201ENST00000365642 335 ntBASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 FTH1P14-201ENST00000482930 551 ntBASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 RNA5SP486-201ENST00000515961 83 ntBASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 AP001002.3-201ENST00000623482 206 ntBASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 FKBP4P6-201ENST00000457486 1332 ntBASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
RTN4IP1Q8WWV3 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms