Protein–RNA interactions for Protein: Q8TAT5

NEIL3, Endonuclease 8-like 3, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3Q8TAT5 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 DPM3-202ENST00000368399 517 ntBASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 AL008707.1-201ENST00000422498 534 ntBASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 PUDPP3-201ENST00000445368 636 ntBASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 ACTG1P17-201ENST00000558391 1119 ntBASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 NDUFV2P1-201ENST00000596415 907 ntBASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 AL356585.2-201ENST00000625078 2396 ntBASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NEIL3Q8TAT5 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 AC090505.1-201ENST00000430515 1834 ntBASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 AC016700.1-201ENST00000429424 312 ntBASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 AC012441.2-201ENST00000444843 739 ntBASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 AC005077.2-201ENST00000449786 690 ntBASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 AL035414.1-201ENST00000451327 857 ntBASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 TMEM198B-204ENST00000484016 896 ntBASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 HIST2H2BC-201ENST00000498492 580 ntBASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 AC013355.1-201ENST00000562625 723 ntBASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 AL136295.7-201ENST00000619226 1200 ntBASIC13.35□□□□□ -0.27
NEIL3Q8TAT5 AC027601.3-201ENST00000622907 509 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms