Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 MIR1909-201ENST00000411312 80 ntBASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 GAPDHP21-201ENST00000450301 1010 ntBASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 AC106886.1-201ENST00000568660 600 ntBASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 AL162274.1-201ENST00000617191 1098 ntBASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 Z98259.2-201ENST00000641583 609 ntBASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 LAP3P2-201ENST00000454686 1454 ntBASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00346Q8IVM7 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 AC079776.1-201ENST00000401540 1152 ntBASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 AC079178.1-201ENST00000420915 656 ntBASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 HLA-V-201ENST00000429037 534 ntBASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 U91328.1-201ENST00000437528 223 ntBASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 ST13P19-201ENST00000442505 1124 ntBASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 MIR6775-201ENST00000617557 69 ntBASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms