Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARS2Q5ST30 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VARS2Q5ST30 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VARS2Q5ST30 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 PPOX-204ENST00000462866 473 ntTSL 5 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARS2Q5ST30 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 AL121694.1-201ENST00000554253 671 ntTSL 5 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 RN7SL665P-201ENST00000578793 300 ntBASIC15.17■□□□□ 0.02
VARS2Q5ST30 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARS2Q5ST30 AL133467.4-201ENST00000602953 725 ntBASIC15.17■□□□□ 0.02
VARS2Q5ST30 AC097065.2-201ENST00000608159 533 ntBASIC15.17■□□□□ 0.02
VARS2Q5ST30 AC005618.3-201ENST00000624928 458 ntBASIC15.17■□□□□ 0.02
VARS2Q5ST30 AC009145.4-201ENST00000625119 1294 ntBASIC15.17■□□□□ 0.02
VARS2Q5ST30 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARS2Q5ST30 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARS2Q5ST30 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARS2Q5ST30 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARS2Q5ST30 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARS2Q5ST30 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 HIST2H2BA-201ENST00000412169 381 ntBASIC15.16■□□□□ 0.02
VARS2Q5ST30 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 AC097065.1-201ENST00000425737 517 ntBASIC15.16■□□□□ 0.02
VARS2Q5ST30 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 AC025244.1-201ENST00000505930 469 ntTSL 3 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 CTBP2P4-201ENST00000513884 920 ntBASIC15.16■□□□□ 0.02
VARS2Q5ST30 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 NDUFB10P1-201ENST00000567319 521 ntBASIC15.16■□□□□ 0.02
VARS2Q5ST30 MIR3180-2-201ENST00000581748 88 ntBASIC15.16■□□□□ 0.02
VARS2Q5ST30 MIR4649-201ENST00000582839 64 ntBASIC15.16■□□□□ 0.02
VARS2Q5ST30 AC107464.3-201ENST00000609172 737 ntBASIC15.16■□□□□ 0.02
VARS2Q5ST30 AL021707.6-201ENST00000609212 491 ntBASIC15.16■□□□□ 0.02
VARS2Q5ST30 AP000484.1-201ENST00000620067 1252 ntBASIC15.16■□□□□ 0.02
VARS2Q5ST30 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 AC025271.4-201ENST00000621477 1726 ntBASIC15.16■□□□□ 0.02
VARS2Q5ST30 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 AC006372.4-201ENST00000624122 1543 ntBASIC15.16■□□□□ 0.02
VARS2Q5ST30 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
VARS2Q5ST30 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VARS2Q5ST30 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.15■□□□□ 0.02
VARS2Q5ST30 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VARS2Q5ST30 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms