Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
DEFA4P12838 RPL28-203ENST00000428193 573 ntTSL 2 BASIC11.72□□□□□ -0.53
DEFA4P12838 RPL28-204ENST00000431533 590 ntTSL 2 BASIC11.72□□□□□ -0.53
DEFA4P12838 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC11.72□□□□□ -0.53
DEFA4P12838 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC11.72□□□□□ -0.53
DEFA4P12838 AC007389.4-201ENST00000454674 793 ntBASIC11.72□□□□□ -0.53
DEFA4P12838 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.72□□□□□ -0.53
DEFA4P12838 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC11.72□□□□□ -0.53
DEFA4P12838 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
DEFA4P12838 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 RPL28-207ENST00000558815 616 ntTSL 2 BASIC11.72□□□□□ -0.53
DEFA4P12838 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
DEFA4P12838 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
DEFA4P12838 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC11.72□□□□□ -0.53
DEFA4P12838 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC11.72□□□□□ -0.53
DEFA4P12838 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC11.72□□□□□ -0.53
DEFA4P12838 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
DEFA4P12838 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
DEFA4P12838 AC015909.5-201ENST00000624336 2266 ntBASIC11.72□□□□□ -0.53
DEFA4P12838 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
DEFA4P12838 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 AC068760.1-201ENST00000493579 1953 ntBASIC11.72□□□□□ -0.53
DEFA4P12838 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
DEFA4P12838 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC11.72□□□□□ -0.53
DEFA4P12838 MSTO2P-201ENST00000314835 1709 ntBASIC11.72□□□□□ -0.53
DEFA4P12838 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
DEFA4P12838 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.71□□□□□ -0.53
DEFA4P12838 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
DEFA4P12838 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
DEFA4P12838 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
DEFA4P12838 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
DEFA4P12838 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
DEFA4P12838 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.71□□□□□ -0.53
DEFA4P12838 AL157996.1-201ENST00000624684 2299 ntBASIC11.71□□□□□ -0.53
DEFA4P12838 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
DEFA4P12838 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC11.71□□□□□ -0.53
DEFA4P12838 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
DEFA4P12838 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
DEFA4P12838 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
DEFA4P12838 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
DEFA4P12838 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
DEFA4P12838 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
DEFA4P12838 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
DEFA4P12838 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
DEFA4P12838 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
DEFA4P12838 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
DEFA4P12838 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC11.71□□□□□ -0.53
DEFA4P12838 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
DEFA4P12838 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC11.71□□□□□ -0.53
DEFA4P12838 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC11.71□□□□□ -0.53
DEFA4P12838 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.71□□□□□ -0.53
DEFA4P12838 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
DEFA4P12838 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC11.71□□□□□ -0.53
DEFA4P12838 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
DEFA4P12838 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC11.71□□□□□ -0.53
DEFA4P12838 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC11.71□□□□□ -0.53
DEFA4P12838 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
DEFA4P12838 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC11.71□□□□□ -0.53
DEFA4P12838 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
DEFA4P12838 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
DEFA4P12838 MIR5189-201ENST00000577370 114 ntBASIC11.71□□□□□ -0.53
DEFA4P12838 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC11.71□□□□□ -0.53
DEFA4P12838 AC015936.2-201ENST00000593177 259 ntBASIC11.71□□□□□ -0.53
DEFA4P12838 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
DEFA4P12838 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.71□□□□□ -0.53
DEFA4P12838 AL358472.5-202ENST00000641448 1267 ntBASIC11.71□□□□□ -0.53
DEFA4P12838 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.71□□□□□ -0.53
DEFA4P12838 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
DEFA4P12838 AC073548.1-201ENST00000624088 1882 ntBASIC11.71□□□□□ -0.53
DEFA4P12838 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC11.71□□□□□ -0.53
DEFA4P12838 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
DEFA4P12838 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.71□□□□□ -0.54
DEFA4P12838 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
DEFA4P12838 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
DEFA4P12838 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
DEFA4P12838 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC11.71□□□□□ -0.54
DEFA4P12838 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
DEFA4P12838 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
DEFA4P12838 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
DEFA4P12838 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
DEFA4P12838 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
DEFA4P12838 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.71□□□□□ -0.54
DEFA4P12838 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
DEFA4P12838 HSPA8P5-201ENST00000456928 2069 ntBASIC11.71□□□□□ -0.54
DEFA4P12838 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
DEFA4P12838 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
DEFA4P12838 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC11.7□□□□□ -0.54
DEFA4P12838 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms