Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 AL022313.4-201ENST00000562756 2046 ntBASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
POLR2J2Q9GZM3 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 CNN2P8-201ENST00000421872 913 ntBASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 AC016694.1-201ENST00000434179 700 ntBASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 AL355994.2-201ENST00000447882 704 ntBASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 COX5BP1-201ENST00000507622 393 ntBASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 SLC25A47P1-201ENST00000531577 414 ntBASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 AC233724.13-201ENST00000598383 410 ntBASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR2J2Q9GZM3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 AL354989.2-201ENST00000435838 1540 ntBASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 AK2P2-201ENST00000439142 405 ntBASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 RN7SL752P-201ENST00000463779 287 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms