Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LRCH1Q9Y2L9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRCH1Q9Y2L9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRCH1Q9Y2L9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH1Q9Y2L9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.43■■□□□ 1.02
LRCH1Q9Y2L9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
LRCH1Q9Y2L9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH1Q9Y2L9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH1Q9Y2L9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH1Q9Y2L9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH1Q9Y2L9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.43■■□□□ 1.02
LRCH1Q9Y2L9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH1Q9Y2L9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
LRCH1Q9Y2L9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH1Q9Y2L9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH1Q9Y2L9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH1Q9Y2L9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
LRCH1Q9Y2L9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH1Q9Y2L9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRCH1Q9Y2L9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRCH1Q9Y2L9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
LRCH1Q9Y2L9 ESRRAP2-201ENST00000418437 1549 ntBASIC21.42■■□□□ 1.02
LRCH1Q9Y2L9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.42■■□□□ 1.02
LRCH1Q9Y2L9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.42■■□□□ 1.02
LRCH1Q9Y2L9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.42■■□□□ 1.02
LRCH1Q9Y2L9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.42■■□□□ 1.02
LRCH1Q9Y2L9 C11orf96-202ENST00000528572 1834 ntBASIC21.42■■□□□ 1.02
LRCH1Q9Y2L9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRCH1Q9Y2L9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
LRCH1Q9Y2L9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRCH1Q9Y2L9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRCH1Q9Y2L9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
LRCH1Q9Y2L9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.41■■□□□ 1.02
LRCH1Q9Y2L9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.41■■□□□ 1.02
LRCH1Q9Y2L9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.41■■□□□ 1.02
LRCH1Q9Y2L9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
LRCH1Q9Y2L9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
LRCH1Q9Y2L9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRCH1Q9Y2L9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRCH1Q9Y2L9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRCH1Q9Y2L9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
LRCH1Q9Y2L9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRCH1Q9Y2L9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
LRCH1Q9Y2L9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRCH1Q9Y2L9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRCH1Q9Y2L9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRCH1Q9Y2L9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRCH1Q9Y2L9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRCH1Q9Y2L9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LRCH1Q9Y2L9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRCH1Q9Y2L9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.4■■□□□ 1.02
LRCH1Q9Y2L9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
LRCH1Q9Y2L9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LRCH1Q9Y2L9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.39■■□□□ 1.01
LRCH1Q9Y2L9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LRCH1Q9Y2L9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRCH1Q9Y2L9 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.39■■□□□ 1.01
LRCH1Q9Y2L9 MIR4449-201ENST00000578365 66 ntBASIC21.39■■□□□ 1.01
LRCH1Q9Y2L9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRCH1Q9Y2L9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.39■■□□□ 1.01
LRCH1Q9Y2L9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRCH1Q9Y2L9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
LRCH1Q9Y2L9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.39■■□□□ 1.01
LRCH1Q9Y2L9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRCH1Q9Y2L9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRCH1Q9Y2L9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.39■■□□□ 1.01
LRCH1Q9Y2L9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRCH1Q9Y2L9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRCH1Q9Y2L9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.39■■□□□ 1.01
LRCH1Q9Y2L9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRCH1Q9Y2L9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRCH1Q9Y2L9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRCH1Q9Y2L9 AC026310.3-201ENST00000625186 2373 ntBASIC21.38■■□□□ 1.01
LRCH1Q9Y2L9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
LRCH1Q9Y2L9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LRCH1Q9Y2L9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRCH1Q9Y2L9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRCH1Q9Y2L9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRCH1Q9Y2L9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
LRCH1Q9Y2L9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRCH1Q9Y2L9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
LRCH1Q9Y2L9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LRCH1Q9Y2L9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRCH1Q9Y2L9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.38■■□□□ 1.01
LRCH1Q9Y2L9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRCH1Q9Y2L9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRCH1Q9Y2L9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.37■■□□□ 1.01
LRCH1Q9Y2L9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRCH1Q9Y2L9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.37■■□□□ 1.01
LRCH1Q9Y2L9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.37■■□□□ 1.01
LRCH1Q9Y2L9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
LRCH1Q9Y2L9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRCH1Q9Y2L9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.36■■□□□ 1.01
LRCH1Q9Y2L9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LRCH1Q9Y2L9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
LRCH1Q9Y2L9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.36■■□□□ 1.01
LRCH1Q9Y2L9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.36■■□□□ 1.01
LRCH1Q9Y2L9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRCH1Q9Y2L9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LRCH1Q9Y2L9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms