Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC32.88■■■□□ 2.85
SLC52A1Q9NWF4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC32.88■■■□□ 2.85
SLC52A1Q9NWF4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
SLC52A1Q9NWF4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
SLC52A1Q9NWF4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
SLC52A1Q9NWF4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC32.88■■■□□ 2.85
SLC52A1Q9NWF4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
SLC52A1Q9NWF4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
SLC52A1Q9NWF4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC32.88■■■□□ 2.85
SLC52A1Q9NWF4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC32.88■■■□□ 2.85
SLC52A1Q9NWF4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC32.87■■■□□ 2.85
SLC52A1Q9NWF4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
SLC52A1Q9NWF4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC32.87■■■□□ 2.85
SLC52A1Q9NWF4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
SLC52A1Q9NWF4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC32.87■■■□□ 2.85
SLC52A1Q9NWF4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC32.86■■■□□ 2.85
SLC52A1Q9NWF4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC32.86■■■□□ 2.85
SLC52A1Q9NWF4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC32.86■■■□□ 2.85
SLC52A1Q9NWF4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
SLC52A1Q9NWF4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC32.85■■■□□ 2.85
SLC52A1Q9NWF4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
SLC52A1Q9NWF4 ALDH1A3-203ENST00000557963 1670 ntBASIC32.85■■■□□ 2.85
SLC52A1Q9NWF4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC32.85■■■□□ 2.85
SLC52A1Q9NWF4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC32.85■■■□□ 2.85
SLC52A1Q9NWF4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
SLC52A1Q9NWF4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC32.85■■■□□ 2.85
SLC52A1Q9NWF4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
SLC52A1Q9NWF4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC32.84■■■□□ 2.85
SLC52A1Q9NWF4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
SLC52A1Q9NWF4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
SLC52A1Q9NWF4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC32.84■■■□□ 2.85
SLC52A1Q9NWF4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
SLC52A1Q9NWF4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC32.84■■■□□ 2.85
SLC52A1Q9NWF4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
SLC52A1Q9NWF4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC32.84■■■□□ 2.85
SLC52A1Q9NWF4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
SLC52A1Q9NWF4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SLC52A1Q9NWF4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC32.83■■■□□ 2.85
SLC52A1Q9NWF4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC32.83■■■□□ 2.85
SLC52A1Q9NWF4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.85
SLC52A1Q9NWF4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC32.82■■■□□ 2.84
SLC52A1Q9NWF4 AC012414.1-201ENST00000556676 535 ntBASIC32.82■■■□□ 2.84
SLC52A1Q9NWF4 AL354811.1-201ENST00000610286 706 ntBASIC32.82■■■□□ 2.84
SLC52A1Q9NWF4 HLA-L-211ENST00000482052 1765 ntBASIC32.82■■■□□ 2.84
SLC52A1Q9NWF4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC32.81■■■□□ 2.84
SLC52A1Q9NWF4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
SLC52A1Q9NWF4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
SLC52A1Q9NWF4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC32.81■■■□□ 2.84
SLC52A1Q9NWF4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC32.81■■■□□ 2.84
SLC52A1Q9NWF4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
SLC52A1Q9NWF4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC32.81■■■□□ 2.84
SLC52A1Q9NWF4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
SLC52A1Q9NWF4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
SLC52A1Q9NWF4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC32.81■■■□□ 2.84
SLC52A1Q9NWF4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
SLC52A1Q9NWF4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
SLC52A1Q9NWF4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC32.8■■■□□ 2.84
SLC52A1Q9NWF4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
SLC52A1Q9NWF4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC32.8■■■□□ 2.84
SLC52A1Q9NWF4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC32.8■■■□□ 2.84
SLC52A1Q9NWF4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
SLC52A1Q9NWF4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
SLC52A1Q9NWF4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC32.79■■■□□ 2.84
SLC52A1Q9NWF4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC32.79■■■□□ 2.84
SLC52A1Q9NWF4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC32.79■■■□□ 2.84
SLC52A1Q9NWF4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
SLC52A1Q9NWF4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC32.78■■■□□ 2.84
SLC52A1Q9NWF4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC32.78■■■□□ 2.84
SLC52A1Q9NWF4 CCDC92B-201ENST00000575506 885 ntBASIC32.78■■■□□ 2.84
SLC52A1Q9NWF4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
SLC52A1Q9NWF4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC32.77■■■□□ 2.84
SLC52A1Q9NWF4 MIR6084-201ENST00000622012 110 ntBASIC32.77■■■□□ 2.84
SLC52A1Q9NWF4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
SLC52A1Q9NWF4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
SLC52A1Q9NWF4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
SLC52A1Q9NWF4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC32.77■■■□□ 2.84
SLC52A1Q9NWF4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC32.77■■■□□ 2.84
SLC52A1Q9NWF4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC32.77■■■□□ 2.84
SLC52A1Q9NWF4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC32.76■■■□□ 2.84
SLC52A1Q9NWF4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
SLC52A1Q9NWF4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC32.76■■■□□ 2.83
SLC52A1Q9NWF4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.83
SLC52A1Q9NWF4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC32.76■■■□□ 2.83
SLC52A1Q9NWF4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC32.76■■■□□ 2.83
SLC52A1Q9NWF4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC32.76■■■□□ 2.83
SLC52A1Q9NWF4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC32.76■■■□□ 2.83
SLC52A1Q9NWF4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.83
SLC52A1Q9NWF4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
SLC52A1Q9NWF4 AL499627.2-201ENST00000606283 725 ntBASIC32.75■■■□□ 2.83
SLC52A1Q9NWF4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC32.75■■■□□ 2.83
SLC52A1Q9NWF4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
SLC52A1Q9NWF4 AC133637.1-201ENST00000624115 1537 ntBASIC32.75■■■□□ 2.83
SLC52A1Q9NWF4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC32.75■■■□□ 2.83
SLC52A1Q9NWF4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
SLC52A1Q9NWF4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC32.74■■■□□ 2.83
SLC52A1Q9NWF4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
SLC52A1Q9NWF4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
SLC52A1Q9NWF4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC32.74■■■□□ 2.83
SLC52A1Q9NWF4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
SLC52A1Q9NWF4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC32.73■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms