Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
NECTIN3Q9NQS3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NECTIN3Q9NQS3 MIR6722-201ENST00000617286 78 ntBASIC21.54■■□□□ 1.04
NECTIN3Q9NQS3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.54■■□□□ 1.04
NECTIN3Q9NQS3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NECTIN3Q9NQS3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NECTIN3Q9NQS3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NECTIN3Q9NQS3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
NECTIN3Q9NQS3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
NECTIN3Q9NQS3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN3Q9NQS3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN3Q9NQS3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN3Q9NQS3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN3Q9NQS3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN3Q9NQS3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN3Q9NQS3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN3Q9NQS3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.53■■□□□ 1.04
NECTIN3Q9NQS3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.53■■□□□ 1.04
NECTIN3Q9NQS3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.52■■□□□ 1.04
NECTIN3Q9NQS3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NECTIN3Q9NQS3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NECTIN3Q9NQS3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NECTIN3Q9NQS3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.52■■□□□ 1.04
NECTIN3Q9NQS3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NECTIN3Q9NQS3 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.52■■□□□ 1.04
NECTIN3Q9NQS3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.52■■□□□ 1.04
NECTIN3Q9NQS3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NECTIN3Q9NQS3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NECTIN3Q9NQS3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
NECTIN3Q9NQS3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NECTIN3Q9NQS3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
NECTIN3Q9NQS3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NECTIN3Q9NQS3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NECTIN3Q9NQS3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.51■■□□□ 1.03
NECTIN3Q9NQS3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NECTIN3Q9NQS3 MIR6724-1-201ENST00000616420 92 ntBASIC21.51■■□□□ 1.03
NECTIN3Q9NQS3 MIR6724-2-201ENST00000616483 92 ntBASIC21.51■■□□□ 1.03
NECTIN3Q9NQS3 MIR6724-4-201ENST00000617390 92 ntBASIC21.51■■□□□ 1.03
NECTIN3Q9NQS3 MIR6724-3-201ENST00000622482 92 ntBASIC21.51■■□□□ 1.03
NECTIN3Q9NQS3 AL161729.1-201ENST00000604104 1402 ntBASIC21.51■■□□□ 1.03
NECTIN3Q9NQS3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NECTIN3Q9NQS3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NECTIN3Q9NQS3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.5■■□□□ 1.03
NECTIN3Q9NQS3 AC131212.1-201ENST00000613771 668 ntBASIC21.5■■□□□ 1.03
NECTIN3Q9NQS3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NECTIN3Q9NQS3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NECTIN3Q9NQS3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NECTIN3Q9NQS3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NECTIN3Q9NQS3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NECTIN3Q9NQS3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
NECTIN3Q9NQS3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NECTIN3Q9NQS3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.49■■□□□ 1.03
NECTIN3Q9NQS3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.49■■□□□ 1.03
NECTIN3Q9NQS3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.49■■□□□ 1.03
NECTIN3Q9NQS3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.49■■□□□ 1.03
NECTIN3Q9NQS3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.49■■□□□ 1.03
NECTIN3Q9NQS3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NECTIN3Q9NQS3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
NECTIN3Q9NQS3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NECTIN3Q9NQS3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NECTIN3Q9NQS3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NECTIN3Q9NQS3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.48■■□□□ 1.03
NECTIN3Q9NQS3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.48■■□□□ 1.03
NECTIN3Q9NQS3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NECTIN3Q9NQS3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.48■■□□□ 1.03
NECTIN3Q9NQS3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NECTIN3Q9NQS3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
NECTIN3Q9NQS3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NECTIN3Q9NQS3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.47■■□□□ 1.03
NECTIN3Q9NQS3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.47■■□□□ 1.03
NECTIN3Q9NQS3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NECTIN3Q9NQS3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NECTIN3Q9NQS3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.47■■□□□ 1.03
NECTIN3Q9NQS3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.47■■□□□ 1.03
NECTIN3Q9NQS3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
NECTIN3Q9NQS3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NECTIN3Q9NQS3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NECTIN3Q9NQS3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NECTIN3Q9NQS3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.46■■□□□ 1.03
NECTIN3Q9NQS3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NECTIN3Q9NQS3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NECTIN3Q9NQS3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.46■■□□□ 1.03
NECTIN3Q9NQS3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NECTIN3Q9NQS3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.46■■□□□ 1.03
NECTIN3Q9NQS3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NECTIN3Q9NQS3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NECTIN3Q9NQS3 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.46■■□□□ 1.03
NECTIN3Q9NQS3 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.46■■□□□ 1.03
NECTIN3Q9NQS3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NECTIN3Q9NQS3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
NECTIN3Q9NQS3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NECTIN3Q9NQS3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
NECTIN3Q9NQS3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
NECTIN3Q9NQS3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
NECTIN3Q9NQS3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
NECTIN3Q9NQS3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NECTIN3Q9NQS3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.45■■□□□ 1.02
NECTIN3Q9NQS3 AC141586.4-201ENST00000624558 1573 ntBASIC21.45■■□□□ 1.02
NECTIN3Q9NQS3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
NECTIN3Q9NQS3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms