Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDC6Q99741 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CDC6Q99741 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDC6Q99741 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC6Q99741 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.95■■□□□ 1.1
CDC6Q99741 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.95■■□□□ 1.1
CDC6Q99741 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDC6Q99741 AC141586.4-201ENST00000624558 1573 ntBASIC21.95■■□□□ 1.1
CDC6Q99741 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CDC6Q99741 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC6Q99741 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.94■■□□□ 1.1
CDC6Q99741 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC6Q99741 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC6Q99741 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC6Q99741 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC6Q99741 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC6Q99741 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC6Q99741 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.94■■□□□ 1.1
CDC6Q99741 AC012414.1-201ENST00000556676 535 ntBASIC21.94■■□□□ 1.1
CDC6Q99741 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDC6Q99741 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.94■■□□□ 1.1
CDC6Q99741 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC6Q99741 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.94■■□□□ 1.1
CDC6Q99741 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDC6Q99741 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
CDC6Q99741 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC6Q99741 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC6Q99741 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDC6Q99741 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.93■■□□□ 1.1
CDC6Q99741 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDC6Q99741 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.93■■□□□ 1.1
CDC6Q99741 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC6Q99741 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.92■■□□□ 1.1
CDC6Q99741 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDC6Q99741 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDC6Q99741 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDC6Q99741 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
CDC6Q99741 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.92■■□□□ 1.1
CDC6Q99741 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC6Q99741 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDC6Q99741 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CDC6Q99741 SLC6A10P-202ENST00000431994 2058 ntBASIC21.91■■□□□ 1.1
CDC6Q99741 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.91■■□□□ 1.1
CDC6Q99741 NTF6G-201ENST00000591094 616 ntBASIC21.91■■□□□ 1.1
CDC6Q99741 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC6Q99741 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDC6Q99741 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.91■■□□□ 1.1
CDC6Q99741 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC6Q99741 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDC6Q99741 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDC6Q99741 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC6Q99741 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC6Q99741 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.9■■□□□ 1.1
CDC6Q99741 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC6Q99741 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC6Q99741 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.9■■□□□ 1.1
CDC6Q99741 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.9■■□□□ 1.1
CDC6Q99741 CCDC92B-201ENST00000575506 885 ntBASIC21.9■■□□□ 1.1
CDC6Q99741 MIR6084-201ENST00000622012 110 ntBASIC21.9■■□□□ 1.1
CDC6Q99741 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CDC6Q99741 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CDC6Q99741 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC6Q99741 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.89■■□□□ 1.09
CDC6Q99741 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.89■■□□□ 1.09
CDC6Q99741 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.89■■□□□ 1.09
CDC6Q99741 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDC6Q99741 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.89■■□□□ 1.09
CDC6Q99741 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDC6Q99741 AC092803.2-201ENST00000564287 1899 ntBASIC21.89■■□□□ 1.09
CDC6Q99741 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDC6Q99741 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDC6Q99741 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDC6Q99741 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
CDC6Q99741 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDC6Q99741 LINC02228-203ENST00000641970 1355 ntBASIC21.88■■□□□ 1.09
CDC6Q99741 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CDC6Q99741 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
CDC6Q99741 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CDC6Q99741 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CDC6Q99741 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CDC6Q99741 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CDC6Q99741 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CDC6Q99741 AL121749.1-202ENST00000609313 2153 ntBASIC21.88■■□□□ 1.09
CDC6Q99741 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.88■■□□□ 1.09
CDC6Q99741 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.88■■□□□ 1.09
CDC6Q99741 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.88■■□□□ 1.09
CDC6Q99741 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.88■■□□□ 1.09
CDC6Q99741 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC6Q99741 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.87■■□□□ 1.09
CDC6Q99741 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC6Q99741 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC6Q99741 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.87■■□□□ 1.09
CDC6Q99741 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.87■■□□□ 1.09
CDC6Q99741 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.87■■□□□ 1.09
CDC6Q99741 KRT18P14-201ENST00000534205 1250 ntBASIC21.87■■□□□ 1.09
CDC6Q99741 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDC6Q99741 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.87■■□□□ 1.09
CDC6Q99741 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC6Q99741 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.87■■□□□ 1.09
CDC6Q99741 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms