Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP4Q99727 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP4Q99727 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP4Q99727 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP4Q99727 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TIMP4Q99727 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP4Q99727 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP4Q99727 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TIMP4Q99727 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.72■□□□□ 0.91
TIMP4Q99727 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP4Q99727 MIR4466-201ENST00000606121 54 ntBASIC20.72■□□□□ 0.91
TIMP4Q99727 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.72■□□□□ 0.91
TIMP4Q99727 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP4Q99727 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP4Q99727 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP4Q99727 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TIMP4Q99727 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP4Q99727 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.72■□□□□ 0.91
TIMP4Q99727 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.72■□□□□ 0.91
TIMP4Q99727 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP4Q99727 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP4Q99727 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TIMP4Q99727 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP4Q99727 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.71■□□□□ 0.91
TIMP4Q99727 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP4Q99727 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.71■□□□□ 0.91
TIMP4Q99727 AL512631.2-201ENST00000604634 923 ntBASIC20.71■□□□□ 0.91
TIMP4Q99727 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.71■□□□□ 0.91
TIMP4Q99727 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.71■□□□□ 0.91
TIMP4Q99727 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP4Q99727 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TIMP4Q99727 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP4Q99727 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TIMP4Q99727 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
TIMP4Q99727 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP4Q99727 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP4Q99727 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TIMP4Q99727 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP4Q99727 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP4Q99727 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.7■□□□□ 0.9
TIMP4Q99727 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TIMP4Q99727 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP4Q99727 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP4Q99727 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP4Q99727 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP4Q99727 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.7■□□□□ 0.9
TIMP4Q99727 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TIMP4Q99727 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP4Q99727 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TIMP4Q99727 AC079834.2-201ENST00000609776 1949 ntBASIC20.69■□□□□ 0.9
TIMP4Q99727 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP4Q99727 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP4Q99727 AL022069.1-201ENST00000568025 1636 ntBASIC20.69■□□□□ 0.9
TIMP4Q99727 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.69■□□□□ 0.9
TIMP4Q99727 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP4Q99727 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP4Q99727 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP4Q99727 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TIMP4Q99727 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP4Q99727 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP4Q99727 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP4Q99727 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TIMP4Q99727 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TIMP4Q99727 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.68■□□□□ 0.9
TIMP4Q99727 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP4Q99727 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP4Q99727 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TIMP4Q99727 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP4Q99727 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP4Q99727 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
TIMP4Q99727 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP4Q99727 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP4Q99727 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TIMP4Q99727 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.67■□□□□ 0.9
TIMP4Q99727 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.67■□□□□ 0.9
TIMP4Q99727 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP4Q99727 AC005703.6-201ENST00000623265 1329 ntBASIC20.67■□□□□ 0.9
TIMP4Q99727 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TIMP4Q99727 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP4Q99727 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP4Q99727 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.67■□□□□ 0.9
TIMP4Q99727 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP4Q99727 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
TIMP4Q99727 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.66■□□□□ 0.9
TIMP4Q99727 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.66■□□□□ 0.9
TIMP4Q99727 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP4Q99727 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP4Q99727 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.66■□□□□ 0.9
TIMP4Q99727 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.66■□□□□ 0.9
TIMP4Q99727 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP4Q99727 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP4Q99727 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP4Q99727 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP4Q99727 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP4Q99727 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP4Q99727 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.66■□□□□ 0.9
TIMP4Q99727 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP4Q99727 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.66■□□□□ 0.9
TIMP4Q99727 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP4Q99727 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms