Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CDCA3Q99618 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDCA3Q99618 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.87■■□□□ 1.41
CDCA3Q99618 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.87■■□□□ 1.41
CDCA3Q99618 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDCA3Q99618 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.87■■□□□ 1.41
CDCA3Q99618 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDCA3Q99618 CCDC92B-201ENST00000575506 885 ntBASIC23.87■■□□□ 1.41
CDCA3Q99618 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDCA3Q99618 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDCA3Q99618 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDCA3Q99618 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDCA3Q99618 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDCA3Q99618 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
CDCA3Q99618 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.86■■□□□ 1.41
CDCA3Q99618 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.86■■□□□ 1.41
CDCA3Q99618 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDCA3Q99618 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.86■■□□□ 1.41
CDCA3Q99618 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDCA3Q99618 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
CDCA3Q99618 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDCA3Q99618 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CDCA3Q99618 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CDCA3Q99618 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.85■■□□□ 1.41
CDCA3Q99618 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.85■■□□□ 1.41
CDCA3Q99618 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.85■■□□□ 1.41
CDCA3Q99618 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDCA3Q99618 MIR6084-201ENST00000622012 110 ntBASIC23.85■■□□□ 1.41
CDCA3Q99618 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CDCA3Q99618 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDCA3Q99618 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.85■■□□□ 1.41
CDCA3Q99618 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDCA3Q99618 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.84■■□□□ 1.41
CDCA3Q99618 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CDCA3Q99618 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDCA3Q99618 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDCA3Q99618 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.84■■□□□ 1.41
CDCA3Q99618 NTF6G-201ENST00000591094 616 ntBASIC23.84■■□□□ 1.41
CDCA3Q99618 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDCA3Q99618 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDCA3Q99618 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.83■■□□□ 1.41
CDCA3Q99618 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDCA3Q99618 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDCA3Q99618 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDCA3Q99618 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDCA3Q99618 LINC02228-203ENST00000641970 1355 ntBASIC23.82■■□□□ 1.4
CDCA3Q99618 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDCA3Q99618 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.82■■□□□ 1.4
CDCA3Q99618 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDCA3Q99618 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.82■■□□□ 1.4
CDCA3Q99618 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDCA3Q99618 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDCA3Q99618 ALDH1A3-203ENST00000557963 1670 ntBASIC23.81■■□□□ 1.4
CDCA3Q99618 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDCA3Q99618 KRT18P14-201ENST00000534205 1250 ntBASIC23.81■■□□□ 1.4
CDCA3Q99618 TERF1P2-201ENST00000583350 1212 ntBASIC23.81■■□□□ 1.4
CDCA3Q99618 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDCA3Q99618 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDCA3Q99618 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDCA3Q99618 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.8■■□□□ 1.4
CDCA3Q99618 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDCA3Q99618 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
CDCA3Q99618 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDCA3Q99618 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.8■■□□□ 1.4
CDCA3Q99618 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.8■■□□□ 1.4
CDCA3Q99618 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDCA3Q99618 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CDCA3Q99618 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CDCA3Q99618 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.79■■□□□ 1.4
CDCA3Q99618 AC133637.1-201ENST00000624115 1537 ntBASIC23.79■■□□□ 1.4
CDCA3Q99618 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDCA3Q99618 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDCA3Q99618 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CDCA3Q99618 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.79■■□□□ 1.4
CDCA3Q99618 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.79■■□□□ 1.4
CDCA3Q99618 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.79■■□□□ 1.4
CDCA3Q99618 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
CDCA3Q99618 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.79■■□□□ 1.4
CDCA3Q99618 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.79■■□□□ 1.4
CDCA3Q99618 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDCA3Q99618 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.79■■□□□ 1.4
CDCA3Q99618 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDCA3Q99618 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.78■■□□□ 1.4
CDCA3Q99618 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDCA3Q99618 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDCA3Q99618 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDCA3Q99618 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
CDCA3Q99618 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDCA3Q99618 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.77■■□□□ 1.4
CDCA3Q99618 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDCA3Q99618 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.77■■□□□ 1.4
CDCA3Q99618 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDCA3Q99618 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDCA3Q99618 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDCA3Q99618 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDCA3Q99618 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDCA3Q99618 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDCA3Q99618 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CDCA3Q99618 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CDCA3Q99618 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms