Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC46Q96FV0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRC46Q96FV0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC46Q96FV0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC46Q96FV0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC46Q96FV0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRC46Q96FV0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
LRRC46Q96FV0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRC46Q96FV0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC46Q96FV0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC46Q96FV0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC46Q96FV0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
LRRC46Q96FV0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.17■□□□□ 0.82
LRRC46Q96FV0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC46Q96FV0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC46Q96FV0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC46Q96FV0 SUDS3P1-201ENST00000505831 966 ntBASIC20.17■□□□□ 0.82
LRRC46Q96FV0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.17■□□□□ 0.82
LRRC46Q96FV0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC46Q96FV0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC46Q96FV0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.16■□□□□ 0.82
LRRC46Q96FV0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.16■□□□□ 0.82
LRRC46Q96FV0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC46Q96FV0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
LRRC46Q96FV0 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.16■□□□□ 0.82
LRRC46Q96FV0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC46Q96FV0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC46Q96FV0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC46Q96FV0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.16■□□□□ 0.82
LRRC46Q96FV0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC46Q96FV0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
LRRC46Q96FV0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC46Q96FV0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC46Q96FV0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC46Q96FV0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC46Q96FV0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC46Q96FV0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC46Q96FV0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC46Q96FV0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC46Q96FV0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LRRC46Q96FV0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.14■□□□□ 0.82
LRRC46Q96FV0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LRRC46Q96FV0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC46Q96FV0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
LRRC46Q96FV0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
LRRC46Q96FV0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
LRRC46Q96FV0 AL138724.1-201ENST00000606771 1088 ntBASIC20.14■□□□□ 0.81
LRRC46Q96FV0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC46Q96FV0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
LRRC46Q96FV0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LRRC46Q96FV0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC46Q96FV0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC46Q96FV0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC46Q96FV0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.13■□□□□ 0.81
LRRC46Q96FV0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LRRC46Q96FV0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC46Q96FV0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC46Q96FV0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.13■□□□□ 0.81
LRRC46Q96FV0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC46Q96FV0 ZNRF2P3-201ENST00000424200 374 ntBASIC20.13■□□□□ 0.81
LRRC46Q96FV0 RARRES2P6-201ENST00000567333 442 ntBASIC20.13■□□□□ 0.81
LRRC46Q96FV0 AC241377.3-202ENST00000626088 1088 ntBASIC20.13■□□□□ 0.81
LRRC46Q96FV0 AC241585.3-202ENST00000628937 1088 ntBASIC20.13■□□□□ 0.81
LRRC46Q96FV0 AC245100.8-202ENST00000629247 1058 ntBASIC20.13■□□□□ 0.81
LRRC46Q96FV0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC46Q96FV0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC46Q96FV0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC46Q96FV0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC46Q96FV0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.12■□□□□ 0.81
LRRC46Q96FV0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC46Q96FV0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.12■□□□□ 0.81
LRRC46Q96FV0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC46Q96FV0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC46Q96FV0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC46Q96FV0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC46Q96FV0 AC091305.1-201ENST00000479476 895 ntBASIC20.12■□□□□ 0.81
LRRC46Q96FV0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.12■□□□□ 0.81
LRRC46Q96FV0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.12■□□□□ 0.81
LRRC46Q96FV0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
LRRC46Q96FV0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
LRRC46Q96FV0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LRRC46Q96FV0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC46Q96FV0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC46Q96FV0 AL031432.3-201ENST00000607698 485 ntBASIC20.11■□□□□ 0.81
LRRC46Q96FV0 MIR5787-201ENST00000611784 55 ntBASIC20.11■□□□□ 0.81
LRRC46Q96FV0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRC46Q96FV0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC46Q96FV0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC46Q96FV0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC46Q96FV0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC46Q96FV0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
LRRC46Q96FV0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.1■□□□□ 0.81
LRRC46Q96FV0 AF213884.3-201ENST00000563833 479 ntBASIC20.1■□□□□ 0.81
LRRC46Q96FV0 MIR6089-201ENST00000616698 64 ntBASIC20.1■□□□□ 0.81
LRRC46Q96FV0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.1■□□□□ 0.81
LRRC46Q96FV0 AC131274.2-201ENST00000580697 1507 ntBASIC20.1■□□□□ 0.81
LRRC46Q96FV0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC46Q96FV0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC46Q96FV0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC46Q96FV0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms