Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RNF31Q96EP0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RNF31Q96EP0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF31Q96EP0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF31Q96EP0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF31Q96EP0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF31Q96EP0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF31Q96EP0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RNF31Q96EP0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF31Q96EP0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF31Q96EP0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RNF31Q96EP0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
RNF31Q96EP0 SERBP1P1-201ENST00000396021 1160 ntBASIC21.67■■□□□ 1.06
RNF31Q96EP0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.67■■□□□ 1.06
RNF31Q96EP0 SUDS3P1-201ENST00000505831 966 ntBASIC21.67■■□□□ 1.06
RNF31Q96EP0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RNF31Q96EP0 MIR4767-201ENST00000582827 78 ntBASIC21.67■■□□□ 1.06
RNF31Q96EP0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF31Q96EP0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF31Q96EP0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF31Q96EP0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF31Q96EP0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RNF31Q96EP0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF31Q96EP0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF31Q96EP0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF31Q96EP0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF31Q96EP0 SYT6-210ENST00000641643 1587 ntBASIC21.66■■□□□ 1.06
RNF31Q96EP0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RNF31Q96EP0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF31Q96EP0 AC105265.2-201ENST00000467189 838 ntBASIC21.66■■□□□ 1.06
RNF31Q96EP0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF31Q96EP0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
RNF31Q96EP0 AC133561.4-201ENST00000566112 224 ntBASIC21.66■■□□□ 1.06
RNF31Q96EP0 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.66■■□□□ 1.06
RNF31Q96EP0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RNF31Q96EP0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF31Q96EP0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF31Q96EP0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RNF31Q96EP0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF31Q96EP0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF31Q96EP0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF31Q96EP0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF31Q96EP0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RNF31Q96EP0 AC138932.3-201ENST00000567634 1902 ntBASIC21.65■■□□□ 1.06
RNF31Q96EP0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF31Q96EP0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF31Q96EP0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF31Q96EP0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF31Q96EP0 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.65■■□□□ 1.06
RNF31Q96EP0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF31Q96EP0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF31Q96EP0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.65■■□□□ 1.06
RNF31Q96EP0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF31Q96EP0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF31Q96EP0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF31Q96EP0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF31Q96EP0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF31Q96EP0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF31Q96EP0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RNF31Q96EP0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RNF31Q96EP0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF31Q96EP0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF31Q96EP0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RNF31Q96EP0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.64■■□□□ 1.05
RNF31Q96EP0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF31Q96EP0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
RNF31Q96EP0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.64■■□□□ 1.05
RNF31Q96EP0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF31Q96EP0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF31Q96EP0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF31Q96EP0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF31Q96EP0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF31Q96EP0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF31Q96EP0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.63■■□□□ 1.05
RNF31Q96EP0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF31Q96EP0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
RNF31Q96EP0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RNF31Q96EP0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF31Q96EP0 AC133561.1-201ENST00000568600 2415 ntBASIC21.63■■□□□ 1.05
RNF31Q96EP0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF31Q96EP0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF31Q96EP0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF31Q96EP0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.62■■□□□ 1.05
RNF31Q96EP0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF31Q96EP0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF31Q96EP0 AP001330.3-201ENST00000520123 633 ntBASIC21.62■■□□□ 1.05
RNF31Q96EP0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RNF31Q96EP0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF31Q96EP0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF31Q96EP0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.62■■□□□ 1.05
RNF31Q96EP0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF31Q96EP0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF31Q96EP0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RNF31Q96EP0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RNF31Q96EP0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RNF31Q96EP0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RNF31Q96EP0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF31Q96EP0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.61■■□□□ 1.05
RNF31Q96EP0 AL355001.2-201ENST00000620617 1191 ntBASIC21.61■■□□□ 1.05
RNF31Q96EP0 AL136967.2-201ENST00000623968 743 ntBASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms