Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL358852.1-201ENST00000623174 1268 ntBASIC27.9■■■□□ 2.06
SNED1Q8TER0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
SNED1Q8TER0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC27.9■■■□□ 2.06
SNED1Q8TER0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.9■■■□□ 2.06
SNED1Q8TER0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
SNED1Q8TER0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC27.89■■■□□ 2.06
SNED1Q8TER0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC27.89■■■□□ 2.06
SNED1Q8TER0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC27.89■■■□□ 2.06
SNED1Q8TER0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.06
SNED1Q8TER0 AC126544.1-201ENST00000580842 1059 ntBASIC27.89■■■□□ 2.06
SNED1Q8TER0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
SNED1Q8TER0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.05
SNED1Q8TER0 DUSP8P4-201ENST00000399538 1761 ntBASIC27.89■■■□□ 2.05
SNED1Q8TER0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
SNED1Q8TER0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC27.89■■■□□ 2.05
SNED1Q8TER0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC27.88■■■□□ 2.05
SNED1Q8TER0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC27.88■■■□□ 2.05
SNED1Q8TER0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
SNED1Q8TER0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
SNED1Q8TER0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC27.88■■■□□ 2.05
SNED1Q8TER0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC27.88■■■□□ 2.05
SNED1Q8TER0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
SNED1Q8TER0 MIR572-201ENST00000384983 95 ntBASIC27.87■■■□□ 2.05
SNED1Q8TER0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC27.87■■■□□ 2.05
SNED1Q8TER0 CCDC92B-201ENST00000575506 885 ntBASIC27.87■■■□□ 2.05
SNED1Q8TER0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC27.87■■■□□ 2.05
SNED1Q8TER0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC27.87■■■□□ 2.05
SNED1Q8TER0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC27.87■■■□□ 2.05
SNED1Q8TER0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SNED1Q8TER0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC27.86■■■□□ 2.05
SNED1Q8TER0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC27.86■■■□□ 2.05
SNED1Q8TER0 NME4-202ENST00000382940 766 ntTSL 3 BASIC27.86■■■□□ 2.05
SNED1Q8TER0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
SNED1Q8TER0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC27.86■■■□□ 2.05
SNED1Q8TER0 MIR6084-201ENST00000622012 110 ntBASIC27.86■■■□□ 2.05
SNED1Q8TER0 AC091060.1-201ENST00000623524 1766 ntBASIC27.86■■■□□ 2.05
SNED1Q8TER0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC27.85■■■□□ 2.05
SNED1Q8TER0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SNED1Q8TER0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC27.85■■■□□ 2.05
SNED1Q8TER0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC27.85■■■□□ 2.05
SNED1Q8TER0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
SNED1Q8TER0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
SNED1Q8TER0 ID1-201ENST00000376105 1233 ntBASIC27.84■■■□□ 2.05
SNED1Q8TER0 AC004911.1-201ENST00000416316 871 ntBASIC27.84■■■□□ 2.05
SNED1Q8TER0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC27.84■■■□□ 2.05
SNED1Q8TER0 TERF1P2-201ENST00000583350 1212 ntBASIC27.84■■■□□ 2.05
SNED1Q8TER0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
SNED1Q8TER0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
SNED1Q8TER0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
SNED1Q8TER0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
SNED1Q8TER0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
SNED1Q8TER0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
SNED1Q8TER0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
SNED1Q8TER0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
SNED1Q8TER0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
SNED1Q8TER0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.83■■■□□ 2.05
SNED1Q8TER0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.83■■■□□ 2.05
SNED1Q8TER0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
SNED1Q8TER0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC27.83■■■□□ 2.05
SNED1Q8TER0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
SNED1Q8TER0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SNED1Q8TER0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SNED1Q8TER0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
SNED1Q8TER0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC27.83■■■□□ 2.05
SNED1Q8TER0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
SNED1Q8TER0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC27.83■■■□□ 2.05
SNED1Q8TER0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.83■■■□□ 2.04
SNED1Q8TER0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SNED1Q8TER0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SNED1Q8TER0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
SNED1Q8TER0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SNED1Q8TER0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
SNED1Q8TER0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SNED1Q8TER0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC27.81■■■□□ 2.04
SNED1Q8TER0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC27.81■■■□□ 2.04
SNED1Q8TER0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SNED1Q8TER0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SNED1Q8TER0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
SNED1Q8TER0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC27.8■■■□□ 2.04
SNED1Q8TER0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC27.8■■■□□ 2.04
SNED1Q8TER0 AL354811.1-201ENST00000610286 706 ntBASIC27.8■■■□□ 2.04
SNED1Q8TER0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
SNED1Q8TER0 AL161729.1-201ENST00000604104 1402 ntBASIC27.8■■■□□ 2.04
SNED1Q8TER0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SNED1Q8TER0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC27.79■■■□□ 2.04
SNED1Q8TER0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC27.79■■■□□ 2.04
SNED1Q8TER0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
SNED1Q8TER0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
SNED1Q8TER0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC27.78■■■□□ 2.04
SNED1Q8TER0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
SNED1Q8TER0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC27.78■■■□□ 2.04
SNED1Q8TER0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC27.78■■■□□ 2.04
SNED1Q8TER0 KRT18P61-201ENST00000585825 1298 ntBASIC27.78■■■□□ 2.04
SNED1Q8TER0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC27.78■■■□□ 2.04
SNED1Q8TER0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
SNED1Q8TER0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC27.78■■■□□ 2.04
SNED1Q8TER0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC27.78■■■□□ 2.04
SNED1Q8TER0 AC141586.4-201ENST00000624558 1573 ntBASIC27.78■■■□□ 2.04
SNED1Q8TER0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
SNED1Q8TER0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC27.78■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms