Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LSMEM1Q8N8F7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.68■□□□□ 0.9
LSMEM1Q8N8F7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSMEM1Q8N8F7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSMEM1Q8N8F7 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.67■□□□□ 0.9
LSMEM1Q8N8F7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.67■□□□□ 0.9
LSMEM1Q8N8F7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.67■□□□□ 0.9
LSMEM1Q8N8F7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.67■□□□□ 0.9
LSMEM1Q8N8F7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LSMEM1Q8N8F7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSMEM1Q8N8F7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LSMEM1Q8N8F7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSMEM1Q8N8F7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.67■□□□□ 0.9
LSMEM1Q8N8F7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.67■□□□□ 0.9
LSMEM1Q8N8F7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.67■□□□□ 0.9
LSMEM1Q8N8F7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSMEM1Q8N8F7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LSMEM1Q8N8F7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
LSMEM1Q8N8F7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.66■□□□□ 0.9
LSMEM1Q8N8F7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSMEM1Q8N8F7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.66■□□□□ 0.9
LSMEM1Q8N8F7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LSMEM1Q8N8F7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
LSMEM1Q8N8F7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LSMEM1Q8N8F7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LSMEM1Q8N8F7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LSMEM1Q8N8F7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.65■□□□□ 0.9
LSMEM1Q8N8F7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
LSMEM1Q8N8F7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LSMEM1Q8N8F7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LSMEM1Q8N8F7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
LSMEM1Q8N8F7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LSMEM1Q8N8F7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSMEM1Q8N8F7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSMEM1Q8N8F7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LSMEM1Q8N8F7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSMEM1Q8N8F7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSMEM1Q8N8F7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSMEM1Q8N8F7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.63■□□□□ 0.89
LSMEM1Q8N8F7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
LSMEM1Q8N8F7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.63■□□□□ 0.89
LSMEM1Q8N8F7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSMEM1Q8N8F7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.63■□□□□ 0.89
LSMEM1Q8N8F7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.63■□□□□ 0.89
LSMEM1Q8N8F7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSMEM1Q8N8F7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSMEM1Q8N8F7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LSMEM1Q8N8F7 AC021242.3-201ENST00000607598 1377 ntBASIC20.62■□□□□ 0.89
LSMEM1Q8N8F7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.62■□□□□ 0.89
LSMEM1Q8N8F7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LSMEM1Q8N8F7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.62■□□□□ 0.89
LSMEM1Q8N8F7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LSMEM1Q8N8F7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.62■□□□□ 0.89
LSMEM1Q8N8F7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LSMEM1Q8N8F7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LSMEM1Q8N8F7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LSMEM1Q8N8F7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LSMEM1Q8N8F7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LSMEM1Q8N8F7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LSMEM1Q8N8F7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.61■□□□□ 0.89
LSMEM1Q8N8F7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.61■□□□□ 0.89
LSMEM1Q8N8F7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
LSMEM1Q8N8F7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LSMEM1Q8N8F7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LSMEM1Q8N8F7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
LSMEM1Q8N8F7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 C9orf163-202ENST00000624034 2573 ntBASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LSMEM1Q8N8F7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.59■□□□□ 0.89
LSMEM1Q8N8F7 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.59■□□□□ 0.89
LSMEM1Q8N8F7 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.59■□□□□ 0.89
LSMEM1Q8N8F7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LSMEM1Q8N8F7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LSMEM1Q8N8F7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LSMEM1Q8N8F7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.59■□□□□ 0.89
LSMEM1Q8N8F7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.59■□□□□ 0.89
LSMEM1Q8N8F7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.59■□□□□ 0.89
LSMEM1Q8N8F7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LSMEM1Q8N8F7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
LSMEM1Q8N8F7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.59■□□□□ 0.89
LSMEM1Q8N8F7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LSMEM1Q8N8F7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms